Gorai.006G118200 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.006G118200 T287589_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04760
M02304_2.00 		Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN		 PBM
Weirauch et al.(2014)
pTH7079 		0.690 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G118200.1 Myb 22 71
Gorai.006G118200.1 Myb 121 168

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000289018 Malus domestica MDP0000289018 I 0.723
TCM_041160 Theobroma cacao TCM_041160 I 0.716
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.716
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.690
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.690
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.690
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.690
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.690
Bra009432 Brassica rapa Bra009432 I 0.690
Bo3g002960 Brassica oleracea Bo3g002960 I 0.690
Bo9g178980 Brassica oleracea Bo9g178980 I 0.690
Ca_05454 Cicer arietinum Ca_05454 I 0.689
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.685
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.685
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.679
Pm017050 Prunus mume Pm017050 I 0.678
Thhalv10014613m.g Eutrema salsugineum Thhalv10014613m.g I 0.676
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.674
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.671
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.670
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.670
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.668
Bra005818 Brassica rapa Bra005818 I 0.666
Aquca_004_00257 Aquilegia coerulea Aquca_004_00257 N 0.663
Solyc05g055240.2 Solanum lycopersicum Solyc05g055240.2 N 0.663
PGSC0003DMG400023495 Solanum tuberosum PGSC0003DMG400023495 N 0.663
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I 0.661