Gorai.006G162800 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.006G162800 T287596_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.784 0.828
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.784 0.828
MYB80
M07142_2.00
Arabidopsis thaliana
NYYYACCTAMYWHNN

NNDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MS188_col_a
0.661 0.667
MYB80
M07143_2.00
Arabidopsis thaliana
YYYACCTAMYTWNNN

NNNWARKTAGGTRRR
Dap-seq
OMalley et al.(2016)
MS188_colamp_a
0.661 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G162800.1 Myb 14 62
Gorai.006G162800.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

515 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BOTBODRAFT_155106 Botryobasidium botryosum BOTBODRAFT_155106 N 0.000
CERSUDRAFT_82708 Ceriporiopsis subvermispora CERSUDRAFT_82708 N 0.000
CC1G_01048 Coprinopsis cinerea CC1G_01048 N 0.000
FIBRA_08487 Fibroporia radiculosa FIBRA_08487 N 0.000
FOMPIDRAFT_1025229 Fomitopsis pinicola FOMPIDRAFT_1025229 N 0.000
Z517_03415 Fonsecaea pedrosoi Z517_03415 N 0.000
GALMADRAFT_269832 Galerina marginata GALMADRAFT_269832 N 0.000
M413DRAFT_15049 Hebeloma cylindrosporum M413DRAFT_15049 N 0.000
estExt_Genewise1.C_20637 Heterobasidion annosum estExt_Genewise1.C_20637 N 0.000
HETIRDRAFT_432523 Heterobasidion irregulare HETIRDRAFT_432523 N 0.000
JAAARDRAFT_31927 Jaapia argillacea JAAARDRAFT_31927 N 0.000
LACBIDRAFT_305811 Laccaria bicolor LACBIDRAFT_305811 N 0.000
E5Q_03246 Mixia osmundae E5Q_03246 N 0.000
Moror_825 Moniliophthora roreri Moror_825 N 0.000
PAXRUDRAFT_821096 Paxillus rubicundulus PAXRUDRAFT_821096 N 0.000
PHACADRAFT_255607 Phanerochaete carnosa PHACADRAFT_255607 N 0.000
fgenesh1_pg.C_scaffold_1000144 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_1000144 N 0.000
PHLGIDRAFT_82021 Phlebiopsis gigantea PHLGIDRAFT_82021 N 0.000
PILCRDRAFT_823319 Piloderma croceum PILCRDRAFT_823319 N 0.000
PISMIDRAFT_670105 Pisolithus microcarpus PISMIDRAFT_670105 N 0.000
PLEOSDRAFT_1110570 Pleurotus ostreatus PLEOSDRAFT_1110570 N 0.000
PAN0_024c6129 Pseudozyma antarctica PAN0_024c6129 N 0.000
PaG_00960 Pseudozyma aphidis PaG_00960 N 0.000
PSEUBRA_SCAF13g01932 Pseudozyma brasiliensis PSEUBRA_SCAF13g01932 N 0.000
PFL1_03819 Pseudozyma flocculosa PFL1_03819 N 0.000
PHSY_007464 Pseudozyma hubeiensis PHSY_007464 N 0.000
SCHCODRAFT_74719 Schizophyllum commune SCHCODRAFT_74719 N 0.000
SCLCIDRAFT_15041 Scleroderma citrinum SCLCIDRAFT_15041 N 0.000
M422DRAFT_71920 Sphaerobolus stellatus M422DRAFT_71920 N 0.000
M422DRAFT_180219 Sphaerobolus stellatus M422DRAFT_180219 N 0.000
sr15132 Sporisorium reilianum sr15132 N 0.000
CY34DRAFT_800522 Suillus luteus CY34DRAFT_800522 N 0.000
BN946_scf185014.g25 Trametes cinnabarina BN946_scf185014.g25 N 0.000
UHOR_06369 Ustilago hordei UHOR_06369 N 0.000
UM04242 Ustilago maydis UM04242 N 0.000