Gorai.006G259700 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.006G259700 T287609_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.854 0.915
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN

NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.820 0.979
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.794 0.851
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.790 0.851
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.790 0.851
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN

NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.786 0.936
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN

NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.675 0.702
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN

NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.674 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G259700.1 Myb 216 266
Gorai.006G259700.2 Myb 216 266
Gorai.006G259700.3 Myb 216 266

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

465 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AFUA_8G02640 Aspergillus fumigatus CADAFUAG00000768 N 0.000
Pc16g00790 Penicillium chrysogenum Pc16g00790 N 0.000
e_gw1.00152.54.1 Aspergillus carbonarius e_gw1.00152.54.1 N 0.000
V565_061160 Rhizoctonia solani V565_061160 N 0.000
U727_00430900321 Penicillium solitum U727_00430900321 N 0.000
PMAA_082750 Talaromyces marneffei PMAA_082750 N 0.000
PCH_Pc16g00790 Penicillium rubens PCH_Pc16g00790 N 0.000
EURHEDRAFT_108649 Aspergillus ruber EURHEDRAFT_108649 N 0.000
COCSADRAFT_178261 Bipolaris sorokiniana COCSADRAFT_178261 N 0.000
COCC4DRAFT_84362 Bipolaris maydis COCC4DRAFT_84362 N 0.000
NFIA_096350 Neosartorya fischeri CADNFIAG00009280 N 0.000
ATEG_10358 Aspergillus terreus CADATEAG00000378 N 0.000
PMAA_082750 Penicillium marneffei PMAA_082750 N 0.000