Gorai.007G001800 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.007G001800 T287612_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.741 0.817
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.741 0.817
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.713 0.828
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G001800.1 Myb 9 56
Gorai.007G001800.1 Myb 62 107

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_012057 Theobroma cacao TCM_012057 I 0.811
Pm024725 Prunus mume Pm024725 I 0.803
MDP0000578193 Malus domestica MDP0000578193 I 0.793
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.793
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.787
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.785
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.784
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.779
MDP0000650225 Malus domestica MDP0000650225 I 0.776
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.776
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.775
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.770
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.765
Bo9g165670 Brassica oleracea Bo9g165670 I 0.758
Bra008740 Brassica rapa Bra008740 I 0.758
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.752
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.751
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.748
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.746
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.745
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.741
WER Arabidopsis thaliana AT5G14750 D 0.741
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.741
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.741
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.741
Bo2g012170 Brassica oleracea Bo2g012170 I 0.741
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.741
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.736
Bra025311 Brassica rapa Bra025311 I 0.736
Bo7g090950 Brassica oleracea Bo7g090950 I 0.734
TCM_016886 Theobroma cacao TCM_016886 I 0.729
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.726
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.715
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.713
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.713
Bra025589 Brassica rapa Bra025589 I 0.713
MYB23 Arabidopsis thaliana AT5G40330 D 0.713
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.713
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.713
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.708
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.708
Bra023486 Brassica rapa Bra023486 I 0.705
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.704
Pm027045 Prunus mume Pm027045 I 0.701
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.698
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.697
Si038905m.g Setaria italica Si038905m.g I 0.697
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.692
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.691
MDP0000266683 Malus domestica MDP0000266683 I 0.690
MDP0000537324 Malus domestica MDP0000537324 I 0.690
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.690
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.689
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.689
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.686
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.686
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.685
Pm006678 Prunus mume Pm006678 I 0.685
SapurV1A.1178s0040 Salix purpurea SapurV1A.1178s0040 N 0.684
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.682
GL1 Arabidopsis thaliana AT3G27920 I 0.682
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.682
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.682
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.682
MDP0000164048 Malus domestica MDP0000164048 I 0.682
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.682
Bra039065 Brassica rapa Bra039065 I 0.682
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.681
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.680
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.680
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.680
TCM_004509 Theobroma cacao TCM_004509 I 0.680
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.680
TCM_037377 Theobroma cacao TCM_037377 I 0.678
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.678
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.678
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.678
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.678
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.678
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.678
MDP0000199965 Malus domestica MDP0000199965 I 0.677
TCM_000535 Theobroma cacao TCM_000535 I 0.675
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.675
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.674
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.674
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.673
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.672
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.672
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.671
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.671
TCM_037376 Theobroma cacao TCM_037376 I 0.671
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.671
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.670
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.669
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.669
TCM_037379 Theobroma cacao TCM_037379 I 0.668
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.668
MDP0000210851 Malus domestica MDP0000210851 I 0.668
MDP0000031172 Malus domestica MDP0000031172 I 0.668
Pm005570 Prunus mume Pm005570 I 0.668
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.668
TCM_010778 Theobroma cacao TCM_010778 I 0.668
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.668
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.668
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.667
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.667
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.667
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.667
Ca_03154 Cicer arietinum Ca_03154 I 0.666
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.666
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.666
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.666
MDP0000184538 Malus domestica MDP0000184538 I 0.666
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.665
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.664
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.664
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.664
TCM_037559 Theobroma cacao TCM_037559 I 0.664
TCM_010360 Theobroma cacao TCM_010360 I 0.663
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.662
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.662
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.661
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.661
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.661
PK16315.1 Cannabis sativa PK16315.1 I 0.661
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.661