Gorai.007G074500 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.007G074500 T287622_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB40
M07126_2.00
Arabidopsis thaliana
YYYACCWAMYHHH

DDDRKTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB40_col_a
0.748 0.839
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.680 0.753
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY

RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.673 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G074500.1 Myb 14 61
Gorai.007G074500.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava17364.m1 Manihot esculenta cassava17364.m1 I 0.861
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I 0.849
mgf018940m Mimulus guttatus mgf018940m I 0.846
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I 0.846
TCM_017051 Theobroma cacao TCM_017051 I 0.846
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I 0.846
AtMYB40 Vitis vinifera VIT_14s0219g00050 I 0.846
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I 0.846
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I 0.846
cassava3745.m1 Manihot esculenta cassava3745.m1 I 0.839
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I 0.833
Ca_19393 Cicer arietinum Ca_19393 I 0.832
Pm015564 Prunus mume Pm015564 I 0.831
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I 0.831
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I 0.831
Lus10032117.g Linum usitatissimum Lus10032117.g I 0.827
29929.m004749 Ricinus communis 29929.m004749 I 0.823
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I 0.816
GLYMA16G06900 Glycine max GLYMA16G06900 I 0.816
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I 0.816
SapurV1A.0136s0070 Salix purpurea SapurV1A.0136s0070 I 0.816
MDP0000303239 Malus domestica MDP0000303239 I 0.812
MDP0000241111 Malus domestica MDP0000241111 I 0.812
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I 0.805
Lus10014569.g Linum usitatissimum Lus10014569.g I 0.802
GLYMA19G07830 Glycine max GLYMA19G07830 I 0.802
Cucsa.156340 Cucumis sativus Cucsa.156340 I 0.795
Cla004104 Citrullus lanatus Cla004104 I 0.795
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.791
GLYMA05G06410 Glycine max GLYMA05G06410 I 0.790
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I 0.782
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I 0.779
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I 0.778
cassava15064.m1 Manihot esculenta cassava15064.m1 I 0.776
Bra008764 Brassica rapa Bra008764 I 0.767
Bra006249 Brassica rapa Bra006249 I 0.767
Bo3g009730 Brassica oleracea Bo3g009730 I 0.767
Bo9g166000 Brassica oleracea Bo9g166000 I 0.758
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I 0.757
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.748
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I 0.748
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I 0.748
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I 0.748
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I 0.746
mgf025004m Mimulus guttatus mgf025004m I 0.736
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N 0.725
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I 0.725
AtMYB40 Populus trichocarpa POPTR_0008s18110 I 0.718
Bo4g101470 Brassica oleracea Bo4g101470 I 0.715
MDP0000787808 Malus domestica MDP0000787808 I 0.707
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I 0.703
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I 0.701
Pavir.J21364 Panicum virgatum Pavir.J21364 I 0.697
Pavir.Ba02150 Panicum virgatum Pavir.Ba02150 I 0.697
Si031939m.g Setaria italica Si031939m.g I 0.697
GSMUA_Achr9G15640_001 Musa acuminata GSMUA_Achr9G15640_001 I 0.697
Pavir.Bb01873 Panicum virgatum Pavir.Bb01873 I 0.697
MDP0000602739 Malus domestica MDP0000602739 I 0.695
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I 0.689
Si030711m.g Setaria italica Si030711m.g I 0.688
Si032544m.g Setaria italica Si032544m.g I 0.688
GSMUA_Achr4G19880_001 Musa acuminata GSMUA_Achr4G19880_001 I 0.688
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I 0.686
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I 0.686
Bostr.25463s0081 Boechera stricta Bostr.25463s0081 I 0.685
Lus10024589.g Linum usitatissimum Lus10024589.g I 0.685
Cucsa.302180 Cucumis sativus Cucsa.302180 I 0.685
POPTR_0015s14600 Populus trichocarpa POPTR_0015s14600 I 0.685
Lus10032226.g Linum usitatissimum Lus10032226.g I 0.685
Traes_5DL_46D39C394 Triticum aestivum Traes_5DL_46D39C394 I 0.684
Traes_5BL_D85C0EF26 Triticum aestivum Traes_5BL_D85C0EF26 I 0.684
F775_13107 Aegilops tauschii F775_13107 I 0.684
OPUNC08G12780 Oryza punctata OPUNC08G12780 I 0.684
BGIOSGA028709 Oryza indica BGIOSGA028709 I 0.681
ORGLA08G0134400 Oryza glaberrima ORGLA08G0134400 I 0.681
OB08G22860 Oryza brachyantha OB08G22860 I 0.681
MYB43 Arabidopsis thaliana AT5G16600 D 0.680
MYB43 Arabidopsis lyrata scaffold_601700.1 I 0.680
Carubv10001378m.g Capsella rubella Carubv10001378m.g I 0.680
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I 0.680
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I 0.680
Pm019472 Prunus mume Pm019472 I 0.678
PRUPE_ppa011549mg Prunus persica PRUPE_ppa011549mg I 0.678
Thhalv10019852m.g Eutrema salsugineum Thhalv10019852m.g I 0.673
MYB43 Vitis vinifera VIT_14s0006g00450 I 0.673
Cucsa.375180 Cucumis sativus Cucsa.375180 I 0.673
PK21166.1 Cannabis sativa PK21166.1 D 0.673
MYB20 Arabidopsis lyrata scaffold_201335.1 I 0.673
Carubv10020766m.g Capsella rubella Carubv10020766m.g I 0.673
Bo6g099800 Brassica oleracea Bo6g099800 I 0.673
GSMUA_Achr5G23110_001 Musa acuminata GSMUA_Achr5G23110_001 I 0.673
Bra004155 Brassica rapa Bra004155 I 0.673
gene30520-v1.0-hybrid Fragaria vesca gene30520-v1.0-hybrid I 0.673
Cagra.1300s0004 Capsella grandiflora Cagra.1300s0004 I 0.673
Pavir.Fb01563 Panicum virgatum Pavir.Fb01563 I 0.673
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.673
Bostr.26959s0295 Boechera stricta Bostr.26959s0295 I 0.673
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I 0.673
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I 0.672
MTR_4g102380 Medicago truncatula MTR_4g102380 I 0.672
Ca_08722 Cicer arietinum Ca_08722 I 0.672
Gorai.006G064000 Gossypium raimondii Gorai.006G064000 I 0.672
PK08857.1 Cannabis sativa PK08857.1 I 0.672
Pavir.Bb02654 Panicum virgatum Pavir.Bb02654 I 0.671
Pavir.Ba01239 Panicum virgatum Pavir.Ba01239 I 0.671
TRIUR3_16495 Triticum urartu TRIUR3_16495 I 0.671
OS09G0532900 Oryza sativa OS09G0532900 I 0.671
MLOC_14021 Hordeum vulgare MLOC_14021 I 0.671
GRMZM2G104551 Zea mays GRMZM2G104551 I 0.671
GRMZM2G048910 Zea mays GRMZM2G048910 I 0.671
Si007017m.g Setaria italica Si007017m.g I 0.671
Sb02g030900 Sorghum bicolor Sb02g030900 I 0.671
MLOC_50944 Hordeum vulgare MLOC_50944 I 0.671
OB06G19130 Oryza brachyantha OB06G19130 I 0.671
OLONG_005336 Oryza longistaminata OLONG_005336 I 0.671
ORGLA06G0093500 Oryza glaberrima ORGLA06G0093500 I 0.671
OB09G24070 Oryza brachyantha OB09G24070 I 0.671
ORGLA09G0137500 Oryza glaberrima ORGLA09G0137500 I 0.671
OS06G0258000 Oryza sativa OS06G0258000 I 0.671
ORUFI06G10280 Oryza rufipogon ORUFI06G10280 I 0.671
Si030750m.g Setaria italica Si030750m.g I 0.671
Sb10g009330 Sorghum bicolor Sb10g009330 I 0.671
F775_17058 Aegilops tauschii F775_17058 I 0.671
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I 0.671
F775_29159 Aegilops tauschii F775_29159 I 0.671
Traes_7DS_5100A9609 Triticum aestivum Traes_7DS_5100A9609 I 0.671
BGIOSGA022649 Oryza indica BGIOSGA022649 I 0.671
BGIOSGA029380 Oryza indica BGIOSGA029380 I 0.671
MYB20 Arabidopsis thaliana AT1G66230 I 0.669
Pavir.Db01743 Panicum virgatum Pavir.Db01743 I 0.669
Sb02g024250 Sorghum bicolor Sb02g024250 I 0.669
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I 0.668
Gorai.006G195700 Gossypium raimondii Gorai.006G195700 I 0.668
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I 0.668
Lus10027197.g Linum usitatissimum Lus10027197.g I 0.668
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I 0.668
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I 0.668
Lus10038913.g Linum usitatissimum Lus10038913.g I 0.668
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I 0.668
GLYMA01G42050 Glycine max GLYMA01G42050 I 0.668
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.668
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.668
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I 0.668
GLYMA17G14291 Glycine max GLYMA17G14291 I 0.668
GLYMA11G03300 Glycine max GLYMA11G03300 I 0.668
F775_19511 Aegilops tauschii F775_19511 I 0.668
MDP0000682032 Malus domestica MDP0000682032 I 0.668
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I 0.668
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I 0.668
cassava33331.m1 Manihot esculenta cassava33331.m1 I 0.668
Cla011736 Citrullus lanatus Cla011736 I 0.668
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I 0.668
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I 0.668
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I 0.668
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I 0.668
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I 0.668
cassava47045.m1 Manihot esculenta cassava47045.m1 I 0.668
Traes_5BL_30D8E6BE2 Triticum aestivum Traes_5BL_30D8E6BE2 I 0.668
Traes_5DL_0B2C5ADF6 Triticum aestivum Traes_5DL_0B2C5ADF6 I 0.668
TCM_016054 Theobroma cacao TCM_016054 I 0.668
mgf017719m Mimulus guttatus mgf017719m I 0.668
TCM_014956 Theobroma cacao TCM_014956 I 0.668
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I 0.668
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I 0.668
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I 0.668
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.668
30190.m011004 Ricinus communis 30190.m011004 I 0.668
Cla003626 Citrullus lanatus Cla003626 I 0.668
Pm023573 Prunus mume Pm023573 I 0.668
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.668
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I 0.668
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.668
Carubv10003172m.g Capsella rubella Carubv10003172m.g I 0.668
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I 0.668
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.668
BGIOSGA030727 Oryza indica BGIOSGA030727 I 0.667
Bo2g013190 Brassica oleracea Bo2g013190 I 0.667
BRADI4G29796 Brachypodium distachyon BRADI4G29796 I 0.667
Pavir.Ba02149 Panicum virgatum Pavir.Ba02149 I 0.667
GRMZM2G126566 Zea mays GRMZM2G126566 I 0.667
Pavir.Bb01872 Panicum virgatum Pavir.Bb01872 I 0.667
ORUFI09G10320 Oryza rufipogon ORUFI09G10320 I 0.667
ORGLA09G0071400 Oryza glaberrima ORGLA09G0071400 I 0.667
Pavir.Ba02148 Panicum virgatum Pavir.Ba02148 I 0.667
OS09G0401000 Oryza sativa OS09G0401000 I 0.667
GRMZM2G169356 Zea mays GRMZM2G169356 I 0.667
Si014144m.g Setaria italica Si014144m.g I 0.664
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I 0.663
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I 0.663
Bo9g163020 Brassica oleracea Bo9g163020 I 0.663
Si032498m.g Setaria italica Si032498m.g I 0.662
Lus10004042.g Linum usitatissimum Lus10004042.g I 0.661