Gorai.007G163400 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.007G163400 T287634_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.715 0.723
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.715 0.723
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.694 0.681
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.694 0.681
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.689 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G163400.1 Myb 92 143

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_14844 Hordeum vulgare MLOC_14844 I 0.731
LPERR04G19690 Leersia perrieri LPERR04G19690 I 0.731
PGSC0003DMG400009304 Solanum tuberosum PGSC0003DMG400009304 I 0.731
OPUNC02G26700 Oryza punctata OPUNC02G26700 I 0.731
MTR_5g027440 Medicago truncatula MTR_5g027440 I 0.731
TCM_016647 Theobroma cacao TCM_016647 I 0.731
Ciclev10002089m.g Citrus clementina Ciclev10002089m.g I 0.731
LPERR02G23680 Leersia perrieri LPERR02G23680 I 0.731
GSMUA_Achr6G01310_001 Musa acuminata GSMUA_Achr6G01310_001 I 0.731
GSMUA_Achr11G06340_001 Musa acuminata GSMUA_Achr11G06340_001 I 0.731
gene13545-v1.0-hybrid Fragaria vesca gene13545-v1.0-hybrid I 0.731
OPUNC04G21550 Oryza punctata OPUNC04G21550 I 0.731
Solyc08g076010.2 Solanum lycopersicum Solyc08g076010.2 I 0.731
mgf004470m Mimulus guttatus mgf004470m I 0.731
OB02G36270 Oryza brachyantha OB02G36270 I 0.731
OGLUM02G29720 Oryza glumaepatula OGLUM02G29720 I 0.731
Ca_11432 Cicer arietinum Ca_11432 I 0.731
VIT_02s0033g00300 Vitis vinifera VIT_02s0033g00300 I 0.731
Traes_6AL_72D2B7C35 Triticum aestivum Traes_6AL_72D2B7C35 I 0.731
ONIVA02G31870 Oryza nivara ONIVA02G31870 I 0.731
Cla002725 Citrullus lanatus Cla002725 I 0.731
OBART02G29100 Oryza barthii OBART02G29100 I 0.731
cassava9333.m1 Manihot esculenta cassava9333.m1 I 0.731
Cucsa.149820 Cucumis sativus Cucsa.149820 I 0.731
OB04G30960 Oryza brachyantha OB04G30960 I 0.731
29827.m002675 Ricinus communis 29827.m002675 I 0.731
Pm023092 Prunus mume Pm023092 I 0.731
Gorai.004G180000 Gossypium raimondii Gorai.004G180000 I 0.731
Gorai.008G221900 Gossypium raimondii Gorai.008G221900 I 0.731
POPTR_0003s09940 Populus trichocarpa POPTR_0003s09940 I 0.731
BGIOSGA008875 Oryza indica BGIOSGA008875 I 0.731
Pavir.Gb00791 Panicum virgatum Pavir.Gb00791 I 0.731
PRUPE_ppa009898mg Prunus persica PRUPE_ppa009898mg I 0.731
Pavir.Ab02790 Panicum virgatum Pavir.Ab02790 I 0.731
Sb04g030830 Sorghum bicolor Sb04g030830 I 0.731
SapurV1A.0051s0450 Salix purpurea SapurV1A.0051s0450 I 0.731
SapurV1A.0063s0360 Salix purpurea SapurV1A.0063s0360 I 0.731
PGSC0003DMG400020455 Solanum tuberosum PGSC0003DMG400020455 I 0.731
chr2.CM0020.340.nc Lotus japonicus chr2.CM0020.340.nc I 0.731
PK02936.1 Cannabis sativa PK02936.1 I 0.731
POPTR_0001s01560 Populus trichocarpa POPTR_0001s01560 I 0.731
OS02G0700300 Oryza sativa OS02G0700300 I 0.731
ORUFI02G30700 Oryza rufipogon ORUFI02G30700 I 0.731
Si010794m.g Setaria italica Si010794m.g I 0.731
ORGLA02G0249400 Oryza glaberrima ORGLA02G0249400 I 0.731
Si018049m.g Setaria italica Si018049m.g I 0.731
GLYMA01G01300 Glycine max GLYMA01G01300 I 0.731
GLYMA09G34461 Glycine max GLYMA09G34461 I 0.731
Solyc06g066180.2 Solanum lycopersicum Solyc06g066180.2 I 0.731
Lus10010404.g Linum usitatissimum Lus10010404.g I 0.731
F775_26343 Aegilops tauschii F775_26343 I 0.731
Pavir.Aa00783 Panicum virgatum Pavir.Aa00783 I 0.731
orange1.1g023210m.g Citrus sinensis orange1.1g023210m.g I 0.731
MDP0000920870 Malus domestica MDP0000920870 I 0.731
Lus10012142.g Linum usitatissimum Lus10012142.g I 0.731
Traes_6DL_EAF038D23 Triticum aestivum Traes_6DL_EAF038D23 I 0.731
AC233960.1_FG003 Zea mays AC233960.1_FG003 I 0.715
Carubv10027834m.g Capsella rubella Carubv10027834m.g I 0.715
Bo7g072630 Brassica oleracea Bo7g072630 I 0.715
Bra025071 Brassica rapa Bra025071 I 0.715
fgenesh1_pg.C_scaffold_8000236 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000236 I 0.715
Cagra.0796s0026 Capsella grandiflora Cagra.0796s0026 I 0.715
Bostr.8819s0083 Boechera stricta Bostr.8819s0083 I 0.715
Thhalv10001175m.g Eutrema salsugineum Thhalv10001175m.g I 0.715
PHL11 Arabidopsis thaliana AT5G45580 D 0.715
AMTR_s00048p00192390 Amborella trichopoda AMTR_s00048p00192390 I 0.713
Si006354m.g Setaria italica Si006354m.g I 0.704
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.704
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.704
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.704
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.704
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.704
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.704
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.704
TCM_027630 Theobroma cacao TCM_027630 I 0.704
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.704
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.704
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.704
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.704
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.704
Si017191m.g Setaria italica Si017191m.g I 0.704
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.704
OS06G0703900 Oryza sativa OS06G0703900 I 0.704
OB06G34350 Oryza brachyantha OB06G34350 I 0.704
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.704
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.704
BRADI1G34470 Brachypodium distachyon BRADI1G34470 I 0.704
F775_29452 Aegilops tauschii F775_29452 I 0.704
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.704
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.698
PHL6 Arabidopsis thaliana AT3G13040 D 0.694
Bra015134 Brassica rapa Bra015134 N 0.691
BRADI5G20520 Brachypodium distachyon BRADI5G20520 I 0.690
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.689
OLONG_005622 Oryza longistaminata OLONG_005622 I 0.689
OB03G25800 Oryza brachyantha OB03G25800 I 0.689
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.689
cassava44101.valid.m1 Manihot esculenta cassava44101.valid.m1 I 0.689
cassava22661.valid.m1 Manihot esculenta cassava22661.valid.m1 I 0.689
29680.m001711 Ricinus communis 29680.m001711 I 0.689
Cla006047 Citrullus lanatus Cla006047 I 0.689
Cla003565 Citrullus lanatus Cla003565 I 0.689
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.689
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.689
Lus10035705.g Linum usitatissimum Lus10035705.g I 0.689
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.689
PHR1 Oryza indica BGIOSGA012553 I 0.689
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.689
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.689
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.689
evm.TU.supercontig_87.3 Carica papaya evm.TU.supercontig_87.3 I 0.689
Aquca_017_00793 Aquilegia coerulea Aquca_017_00793 I 0.689
LPERR03G14050 Leersia perrieri LPERR03G14050 I 0.689
Eucgr.A01323 Eucalyptus grandis Eucgr.A01323 I 0.689
OMERI03G14370 Oryza meridionalis OMERI03G14370 I 0.689
Cucsa.037070 Cucumis sativus Cucsa.037070 I 0.689
Cucsa.027530 Cucumis sativus Cucsa.027530 I 0.689
OPUNC03G15590 Oryza punctata OPUNC03G15590 I 0.689
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.689
ONIVA03G17050 Oryza nivara ONIVA03G17050 I 0.689
PHR1 Oryza sativa OS03G0329900 D 0.689
Solyc06g008200.2 Solanum lycopersicum Solyc06g008200.2 I 0.689
ORGLA03G0154000 Oryza glaberrima ORGLA03G0154000 I 0.689
Pavir.J27649 Panicum virgatum Pavir.J27649 I 0.686
ORUFI02G03130 Oryza rufipogon ORUFI02G03130 I 0.684
ORGLA02G0030200 Oryza glaberrima ORGLA02G0030200 I 0.684
Gorai.001G225500 Gossypium raimondii Gorai.001G225500 N 0.684
OMERI02G03860 Oryza meridionalis OMERI02G03860 I 0.684
OPUNC02G02530 Oryza punctata OPUNC02G02530 I 0.684
OBART02G03200 Oryza barthii OBART02G03200 I 0.684
OGLUM02G03100 Oryza glumaepatula OGLUM02G03100 I 0.684
ONIVA02G03010 Oryza nivara ONIVA02G03010 I 0.684
PHR3 Oryza indica BGIOSGA007162 I 0.684
OB02G12880 Oryza brachyantha OB02G12880 I 0.684
PHR3 Oryza sativa OS02G0139000 I 0.684
Lus10037296.g Linum usitatissimum Lus10037296.g I 0.683
BRADI3G03538 Brachypodium distachyon BRADI3G03538 I 0.683
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.683
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.683
AMTR_s00025p00151950 Amborella trichopoda AMTR_s00025p00151950 I 0.682
GRMZM2G125704 Zea mays GRMZM2G125704 I 0.680
mgf011847m Mimulus guttatus mgf011847m I 0.678
BRADI1G63530 Brachypodium distachyon BRADI1G63530 I 0.678
Solyc04g050070.1 Solanum lycopersicum Solyc04g050070.1 I 0.678
Traes_2BS_34669CA7B Triticum aestivum Traes_2BS_34669CA7B I 0.673
TRIUR3_16070 Triticum urartu TRIUR3_16070 I 0.673
MLOC_52706 Hordeum vulgare MLOC_52706 I 0.673
Traes_2AS_28B163E7C Triticum aestivum Traes_2AS_28B163E7C I 0.673
Traes_2DS_8EA143F67 Triticum aestivum Traes_2DS_8EA143F67 I 0.673
F775_02978 Aegilops tauschii F775_02978 I 0.673
Traes_2BL_FA727026F Triticum aestivum Traes_2BL_FA727026F I 0.671
Sb06g027405 Sorghum bicolor Sb06g027405 I 0.671
SELMODRAFT_438638 Selaginella moellendorffii SELMODRAFT_438638 I 0.671
BGIOSGA017051 Oryza indica BGIOSGA017051 I 0.671
Pavir.Ga00732 Panicum virgatum Pavir.Ga00732 I 0.671
Pavir.Bb03727 Panicum virgatum Pavir.Bb03727 I 0.671
Pm013132 Prunus mume Pm013132 I 0.671
ORUFI04G25750 Oryza rufipogon ORUFI04G25750 I 0.671
gene05518-v1.0-hybrid Fragaria vesca gene05518-v1.0-hybrid I 0.671
F775_12865 Aegilops tauschii F775_12865 I 0.671
OBART04G24010 Oryza barthii OBART04G24010 I 0.671
PRUPE_ppa005159mg Prunus persica PRUPE_ppa005159mg I 0.671
SELMODRAFT_447259 Selaginella moellendorffii SELMODRAFT_447259 I 0.671
OS04G0600000 Oryza sativa OS04G0600000 I 0.671
Traes_2AL_8D3A3687D Triticum aestivum Traes_2AL_8D3A3687D I 0.671
PK01823.1 Cannabis sativa PK01823.1 I 0.671
MLOC_8187 Hordeum vulgare MLOC_8187 I 0.671
mgf005047m Mimulus guttatus mgf005047m I 0.671
Solyc09g072830.2 Solanum lycopersicum Solyc09g072830.2 I 0.671
OGLUM04G23960 Oryza glumaepatula OGLUM04G23960 I 0.671
ORGLA04G0205700 Oryza glaberrima ORGLA04G0205700 I 0.671
ONIVA04G23170 Oryza nivara ONIVA04G23170 I 0.671
fgenesh1_pg.scaffold_391000034 Physcomitrella patens fgenesh1_pg.scaffold_391000034 I 0.668
fgenesh1_pg.scaffold_143000021 Physcomitrella patens fgenesh1_pg.scaffold_143000021 I 0.668
30169.m006598 Ricinus communis 30169.m006598 I 0.667
PGSC0003DMG400023467 Solanum tuberosum PGSC0003DMG400023467 I 0.667
Solyc05g055940.2 Solanum lycopersicum Solyc05g055940.2 I 0.667
PRUPE_ppa023008mg Prunus persica PRUPE_ppa023008mg I 0.666
MDP0000773970 Malus domestica MDP0000773970 I 0.666
LPERR02G03030 Leersia perrieri LPERR02G03030 I 0.666
gene18340-v1.0-hybrid Fragaria vesca gene18340-v1.0-hybrid I 0.666
MDP0000241055 Malus domestica MDP0000241055 I 0.666
estExt_fgenesh1_pg.C_90140 Physcomitrella patens estExt_fgenesh1_pg.C_90140 I 0.665
Thhalv10002873m.g Eutrema salsugineum Thhalv10002873m.g N 0.664
AT2G06020 Arabidopsis thaliana AT2G06020 N 0.664
fgenesh1_pm.C_scaffold_3002359 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002359 N 0.664
Bostr.24399s0035 Boechera stricta Bostr.24399s0035 N 0.664
Carubv10016382m.g Capsella rubella Carubv10016382m.g N 0.664
Cagra.5641s0065 Capsella grandiflora Cagra.5641s0065 I 0.662
GSMUA_AchrUn_randomG10390_001 Musa acuminata GSMUA_AchrUn_randomG10390_001 I 0.662
Bostr.3640s0078 Boechera stricta Bostr.3640s0078 I 0.662
Carubv10013698m.g Capsella rubella Carubv10013698m.g I 0.662
OLONG_010553 Oryza longistaminata OLONG_010553 I 0.661
OB02G43730 Oryza brachyantha OB02G43730 I 0.661
TRIUR3_02291 Triticum urartu TRIUR3_02291 I 0.661
ORUFI02G38560 Oryza rufipogon ORUFI02G38560 I 0.661
BGIOSGA005373 Oryza indica BGIOSGA005373 I 0.661
Traes_6BL_5D8EE6802 Triticum aestivum Traes_6BL_5D8EE6802 I 0.661