CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.008G117400
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.008G117400
T287665_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G117400.1
Myb
35
76
KGGWTEEEDNMLTIAVQKFNGKNWKKIGITDVQCLHRWQKVL
Gorai.008G117400.1
Myb
82
128
KGPWTKEEDDLIFELVEKQGKKKWSEIAKFLPGRIGKQCRERWCNHL
Gorai.008G117400.1
Myb
134
178
KTAWTVDEELILISAHGAYGNRWAEIAKLLPGRTENSIKNHWNSS
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_005402
Theobroma cacao
TCM_005402
I
0.784
gene19115-v1.0-hybrid
Fragaria vesca
gene19115-v1.0-hybrid
I
0.711
Pm018007
Prunus mume
Pm018007
I
0.704
PRUPE_ppa022218mg
Prunus persica
PRUPE_ppa022218mg
I
0.704
ATMYB3R2
Vitis vinifera
VIT_15s0048g02120
N
0.693
Aquca_013_00366
Aquilegia coerulea
Aquca_013_00366
I
0.689
evm.TU.supercontig_18.208
Carica papaya
evm.TU.supercontig_18.208
N
0.675
OPUNC01G07980
Oryza punctata
OPUNC01G07980
I
0.666
OPUNC01G08000
Oryza punctata
OPUNC01G08000
I
0.666
OPUNC05G16800
Oryza punctata
OPUNC05G16800
I
0.664
Gorai.009G051000
Gossypium raimondii
Gorai.009G051000
I
0.662
TCM_047091
Theobroma cacao
TCM_047091
I
0.662