Gorai.008G158000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.008G158000 T287676_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.688 0.817
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.688 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G158000.1 Myb 13 54
Gorai.008G158000.1 Myb 61 85
Gorai.008G158000.1 Myb 91 136
Gorai.008G158000.2 Myb 13 60
Gorai.008G158000.2 Myb 66 111

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action