CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.008G288900
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.008G288900
T287692_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G288900.1
Myb
391
428
TPERIREFLPKVDWNQLASFYVKGRCGAECETRWLNHE
Gorai.008G288900.1
Myb
434
481
RNPWTAEEDKNLLLIVQEMGIDNWFDIAVSLASNRTPFQCLARYQRSL
Gorai.008G288900.1
Myb
487
533
KREWTEEEDDQLRIAVEVFGESDWQSVASTLKGRTGTQCSNRWKKSL
Gorai.008G288900.1
Myb
540
586
VGRWTRDEDKRLKVAVLLFGPKNWRKIAQVVPGRTQVQCRERWVNSL
Gorai.008G288900.1
Myb
593
637
GIWTEEEDSRLEAAIEEHGYCWSKVATCVASRTDNQCWRRWKTLH
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.1847s0020
Salix purpurea
SapurV1A.1847s0020
N
0.719
MYB4R1
Populus trichocarpa
POPTR_0015s04260
N
0.714
PRUPE_ppa000733mg
Prunus persica
PRUPE_ppa000733mg
N
0.683
Eucgr.B00857
Eucalyptus grandis
Eucgr.B00857
N
0.681
Pm025109
Prunus mume
Pm025109
N
0.665