CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G413600
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.009G413600
T287732_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.701
0.674
MYB27
M07097_2.00
Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD
Dap-seq
OMalley et al.(2016)
MYB27_col_a
0.690
0.728
MYB27
M07098_2.00
Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN
Dap-seq
OMalley et al.(2016)
MYB27_colamp_a
0.690
0.728
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G413600.1
Myb
17
64
KGPWHEEEDERLISFVKLLGSRRWDYIAQASGLKRSGKSCRLRWVNYL
Gorai.009G413600.1
Myb
71
115
SSISAEEEMIILKLHQKWGNKWSMIARMLPGRTDNEIKNYWRTHL
Gorai.009G413600.2
Myb
17
64
KGPWHEEEDERLISFVKLLGSRRWDYIAQASGLKRSGKSCRLRWVNYL
Gorai.009G413600.2
Myb
71
115
SSISAEEEMIILKLHQKWGNKWSMIARMLPGRTDNEIKNYWRTHL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy