Gorai.011G021300 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.011G021300 T287760_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G021300.1 Myb 12 59
Gorai.011G021300.1 Myb 65 110
Gorai.011G021300.2 Myb 12 59
Gorai.011G021300.2 Myb 65 110
Gorai.011G021300.3 Myb 12 59
Gorai.011G021300.3 Myb 65 110

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.803
TCM_030020 Theobroma cacao TCM_030020 I 0.798
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.787
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.782
MDP0000131822 Malus domestica MDP0000131822 I 0.782
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.777
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.776
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.762
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.757
MDP0000289283 Malus domestica MDP0000289283 I 0.756
Pm009880 Prunus mume Pm009880 N 0.756
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.756
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.755
MDP0000155426 Malus domestica MDP0000155426 I 0.750
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.747
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.746
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.741
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.738
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.736
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.735
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.732
29933.m001454 Ricinus communis 29933.m001454 N 0.731
MDP0000407613 Malus domestica MDP0000407613 N 0.730
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.728
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.725
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.720
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.719
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.717
TCM_007865 Theobroma cacao TCM_007865 I 0.717
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.714
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.714
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.711
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.708
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.707
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.706
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.706
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.706
Eucgr.I00828 Eucalyptus grandis Eucgr.I00828 N 0.705
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.703
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.700
Pm015302 Prunus mume Pm015302 N 0.699
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.699
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.698
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.693
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.692
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.691
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.690
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.690
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.689
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.689
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.689
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.687
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.685
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N 0.685
TCM_033016 Theobroma cacao TCM_033016 N 0.683
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.683
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.683
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.682
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.682
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.681
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.681
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.680
TCM_026197 Theobroma cacao TCM_026197 I 0.680
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.680
PK24260.1 Cannabis sativa PK24260.1 N 0.677
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.677
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.676
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.676
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.676
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.676
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.676
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.675
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.675
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.675
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.675
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.674
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.673
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.673
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.672
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.672
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.672
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.672
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.671
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.671
PK20358.1 Cannabis sativa PK20358.1 I 0.670
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.670
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.670
Cla006077 Citrullus lanatus Cla006077 I 0.670
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.670
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.669
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.668
TCM_007868 Theobroma cacao TCM_007868 I 0.667
TCM_033015 Theobroma cacao TCM_033015 N 0.667
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.667
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.666
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.665
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.665
GLYMA06G45570 Glycine max GLYMA06G45570 I 0.664
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.663
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.662
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.662
Ca_12130 Cicer arietinum Ca_12130 I 0.661
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.661
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.661
PK08038.1 Cannabis sativa PK08038.1 I 0.661