Gorai.012G135600 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.012G135600 T287794_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SRM1
M02307_2.00
Arabidopsis thaliana
NNHNATCNN

NNGATNDNN
PBM
Weirauch et al.(2014)
pTH7080
0.726 0.846
SRM1
M07121_2.00
Arabidopsis thaliana
YCTTATCYWHW

WDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a
0.726 0.846
SRM1
M07122_2.00
Arabidopsis thaliana
YCTTATCYWHWWH

DWWDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_col_b
0.726 0.846
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G135600.1 Myb 119 164
Gorai.012G135600.2 Myb 119 164
Gorai.012G135600.3 Myb 119 164
Gorai.012G135600.4 Myb 119 164
Gorai.012G135600.5 Myb 119 164
Gorai.012G135600.6 Myb 119 164
Gorai.012G135600.7 Myb 119 164
Gorai.012G135600.8 Myb 119 164
Gorai.012G135600.9 Myb 119 164

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action