Gorai.013G071600 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G071600 T287804_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH

DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.680 0.699
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN

NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.680 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G071600.1 Myb 14 61
Gorai.013G071600.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POU2F3 Bos taurus ENSBTAG00000021340 I 0.000
POU2F3 Callithrix jacchus ENSCJAG00000014166 I 0.000
POU2F3 Cavia porcellus ENSCPOG00000010476 I 0.000
ENSCSAG00000002476 Chlorocebus sabaeus ENSCSAG00000002476 I 0.000
POU2F3 Equus caballus ENSECAG00000019818 I 0.000
POU2F3 Homo sapiens ENSG00000137709 D 0.000
POU2F3 Gorilla gorilla ENSGGOG00000008715 I 0.000
POU2F3 Loxodonta africana ENSLAFG00000007476 I 0.000
POU2F3 Macaca mulatta ENSMMUG00000012251 I 0.000
ENSNLEG00000007403 Nomascus leucogenys ENSNLEG00000007403 I 0.000
ENSOARG00000016819 Ovis aries ENSOARG00000016819 I 0.000
ENSP00000260264 Macaca fascicularis ENSP00000260264 I 0.000
ENSPANG00000005039 Papio anubis ENSPANG00000005039 I 0.000
ENSSTOG00000015839 Ictidomys tridecemlineatus ENSSTOG00000015839 I 0.000