Gorai.013G072900 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G072900 T287805_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH

DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.680 0.699
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN

NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.680 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G072900.1 Myb 14 61
Gorai.013G072900.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.676
Aquca_030_00245 Aquilegia coerulea Aquca_030_00245 N 0.699
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.680
BGIOSGA006005 Oryza indica BGIOSGA006005 I 0.674
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.704
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.682
Bostr.25219s0339 Boechera stricta Bostr.25219s0339 I 0.680
Cagra.1671s0249 Capsella grandiflora Cagra.1671s0249 I 0.663
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.723
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.710
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.670
cassava26895.m1 Manihot esculenta cassava26895.m1 N 0.665
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.680
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.693
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.730
Ca_22597 Cicer arietinum Ca_22597 N 0.680
chr1.CM0295.20.nd Lotus japonicus chr1.CM0295.20.nd I 0.663
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.664
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.665
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.685
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.664
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.663
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.669
Cla006077 Citrullus lanatus Cla006077 I 0.672
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.663
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.661
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.664
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.664
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.671
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.682
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.679
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.663
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.663
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.680
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.738
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.672
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I 0.663
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.679
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.683
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.708
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.721
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.756
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.679
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.683
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.665
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.678
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.663
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.684
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I 0.675
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I 0.678
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.663
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.804
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.671
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.670
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.663
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.679
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.909
Gorai.013G073000 Gossypium raimondii Gorai.013G073000 N 0.739
GRMZM2G127857 Zea mays GRMZM2G127857 I 0.667
GRMZM2G147346 Zea mays GRMZM2G147346 I 0.705
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.732
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.701
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.677
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.680
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.661
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.700
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.668
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.682
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.713
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.711
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.672
Lus10018518.g Linum usitatissimum Lus10018518.g N 0.690
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.686
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.686
Lus10033737.g Linum usitatissimum Lus10033737.g N 0.699
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.689
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.672
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.689
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.688
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.686
MDP0000131822 Malus domestica MDP0000131822 I 0.669
MDP0000145050 Malus domestica MDP0000145050 I 0.672
MDP0000148689 Malus domestica MDP0000148689 N 0.665
MDP0000155426 Malus domestica MDP0000155426 I 0.677
MDP0000407613 Malus domestica MDP0000407613 N 0.674
MDP0000897594 Malus domestica MDP0000897594 I 0.689
mgf011672m Mimulus guttatus mgf011672m I 0.679
mgf018684m Mimulus guttatus mgf018684m N 0.683
mgf022141m Mimulus guttatus mgf022141m N 0.662
mgf022158m Mimulus guttatus mgf022158m N 0.683
MTR_0008s0280 Medicago truncatula MTR_0008s0280 N 0.667
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.676
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.668
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.676
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.696
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.713
OB02G31990 Oryza brachyantha OB02G31990 I 0.674
OB04G25860 Oryza brachyantha OB04G25860 I 0.672
OMERI10G10120 Oryza meridionalis OMERI10G10120 I 0.663
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.668
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.691
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.674
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I 0.674
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.672
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I 0.674
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.672
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.704
MYB30 Oryza sativa OS02G0624300 I 0.674
OS10G0478300 Oryza sativa OS10G0478300 I 0.704
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.661
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.661
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.668
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.698
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.698
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.689
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.674
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.663
PGSC0003DMG400046667 Solanum tuberosum PGSC0003DMG400046667 N 0.723
PGSC0003DMG400047175 Solanum tuberosum PGSC0003DMG400047175 N 0.704
PK08038.1 Cannabis sativa PK08038.1 I 0.672
PK18231.1 Cannabis sativa PK18231.1 I 0.663
PK20358.1 Cannabis sativa PK20358.1 I 0.663
PK24260.1 Cannabis sativa PK24260.1 N 0.662
PK29337.1 Cannabis sativa PK29337.1 I 0.666
Pm009880 Prunus mume Pm009880 N 0.663
Pm015302 Prunus mume Pm015302 N 0.673
Pm015303 Prunus mume Pm015303 I 0.685
Pm020596 Prunus mume Pm020596 I 0.672
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.680
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.676
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.680
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.666
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.717
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.675
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.672
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.685
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.673
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.663
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.728
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.677
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.683
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.714
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.680
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.728
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.698
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.661
SELMODRAFT_38058 Selaginella moellendorffii SELMODRAFT_38058 I 0.661
Si010814m.g Setaria italica Si010814m.g I 0.672
Si040527m.g Setaria italica Si040527m.g I 0.698
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.670
Solyc07g054960.1 Solanum lycopersicum Solyc07g054960.1 I 0.674
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.684
Solyc08g076700.1 Solanum lycopersicum Solyc08g076700.1 I 0.663
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.663
TCM_004046 Theobroma cacao TCM_004046 I 0.663
TCM_007865 Theobroma cacao TCM_007865 I 0.686
TCM_007868 Theobroma cacao TCM_007868 I 0.818
TCM_026197 Theobroma cacao TCM_026197 I 0.690
TCM_030020 Theobroma cacao TCM_030020 I 0.668
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.680
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.707
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.663
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.706
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.737