Gorai.013G072900 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G072900 T287805_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH

DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.680 0.699
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN

NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.680 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G072900.1 Myb 14 61
Gorai.013G072900.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SNOG_12221 Stagonospora nodorum SNOG_12221 N 0.000
estExt_fgenesh1_pg.C_260064 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_260064 N 0.000
VHEMI07914 Torrubiella hemipterigena VHEMI07914 N 0.000
TRIATDRAFT_161664 Trichoderma atroviride TRIATDRAFT_161664 N 0.000
SNOG_12221 Phaeosphaeria nodorum SNOG_12221 N 0.000
SETTUDRAFT_183195 Setosphaeria turcica SETTUDRAFT_183195 N 0.000
PTT_12885 Pyrenophora teres PTT_12885 N 0.000
PTRG_03338 Pyrenophora triticirepentis PTRG_03338 N 0.000
PGTG_04339 Puccinia graminis PGTG_04339 N 0.000
OIDMADRAFT_162843 Oidiodendron maius OIDMADRAFT_162843 N 0.000
MBM_02991 Marssonina brunnea MBM_02991 N 0.000
M378DRAFT_479088 Amanita muscaria M378DRAFT_479088 N 0.000
LEMA_P095580.1 Leptosphaeria maculans LEMA_P095580.1 N 0.000
COCVIDRAFT_107914 Bipolaris victoriae COCVIDRAFT_107914 N 0.000
COCSADRAFT_277515 Bipolaris sorokiniana COCSADRAFT_277515 N 0.000
COCMIDRAFT_4549 Bipolaris oryzae COCMIDRAFT_4549 N 0.000
COCC4DRAFT_204146 Bipolaris maydis COCC4DRAFT_204146 N 0.000
CADANGAG00002230 Aspergillus niger CADANGAG00002230 N 0.000
AB01860.1 Alternaria brassicicola AB01860.1 N 0.000