CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G073000
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.013G073000
T287806_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G073000.1
Myb
3
50
KGEWSAEEDDKLRTYVQKYGHWNWHQLPKFAGLKRCGKSCRWRWMNYL
Gorai.013G073000.1
Myb
56
101
RGNFTEEEDALIIKLHEQFGNRWSTIAKSLRGRTDSEIKNHWHSQL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.013G071600
Gossypium raimondii
Gorai.013G071600
I
0.739
Gorai.013G072900
Gossypium raimondii
Gorai.013G072900
I
0.739
Gorai.008G151100
Gossypium raimondii
Gorai.008G151100
I
0.711
gene01997-v1.0-hybrid
Fragaria vesca
gene01997-v1.0-hybrid
I
0.701
POPTR_0019s14120
Populus trichocarpa
POPTR_0019s14120
I
0.694
TCM_007868
Theobroma cacao
TCM_007868
I
0.693
orange1.1g042846m.g
Citrus sinensis
orange1.1g042846m.g
I
0.691
SapurV1A.0417s0150
Salix purpurea
SapurV1A.0417s0150
I
0.691
Ciclev10017677m.g
Citrus clementina
Ciclev10017677m.g
I
0.676
GLYMA13G37903
Glycine max
GLYMA13G37903
I
0.676
SapurV1A.2051s0040
Salix purpurea
SapurV1A.2051s0040
I
0.675
SapurV1A.0048s0170
Salix purpurea
SapurV1A.0048s0170
I
0.675
cassava6764.valid.m1
Manihot esculenta
cassava6764.valid.m1
I
0.674
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
0.673
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.668