Gorai.013G114900 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G114900 T287816_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.748 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G114900.1 Myb 26 73
Gorai.013G114900.1 Myb 79 124

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_06s0004g00570 Vitis vinifera VIT_06s0004g00570 I 0.791
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I 0.785
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.784
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.784
Gorai.007G260600 Gossypium raimondii Gorai.007G260600 I 0.784
MTR_3g083540 Medicago truncatula MTR_3g083540 I 0.781
GSMUA_Achr7G13700_001 Musa acuminata GSMUA_Achr7G13700_001 I 0.780
AMTR_s00068p00097220 Amborella trichopoda AMTR_s00068p00097220 I 0.779
AMTR_s00068p00092800 Amborella trichopoda AMTR_s00068p00092800 I 0.779
PK13689.1 Cannabis sativa PK13689.1 I 0.777
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.769
Aquca_009_00496 Aquilegia coerulea Aquca_009_00496 I 0.768
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.768
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.767
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.767
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.767
LjT20L14.140.nd Lotus japonicus LjT20L14.140.nd I 0.761
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.760
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.760
MDP0000723614 Malus domestica MDP0000723614 I 0.760
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.760
MDP0000655330 Malus domestica MDP0000655330 I 0.760
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.760
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.760
TCM_025910 Theobroma cacao TCM_025910 I 0.760
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.760
TCM_024180 Theobroma cacao TCM_024180 I 0.760
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.760
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.757
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I 0.757
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.757
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.757
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.757
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.755
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.753
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.751
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.751
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.751
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.751
MDP0000791870 Malus domestica MDP0000791870 I 0.751
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I 0.751
Bra039395 Brassica rapa Bra039395 I 0.750
GSMUA_Achr2G19380_001 Musa acuminata GSMUA_Achr2G19380_001 I 0.750
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.749
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.749
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.748
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.747
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.747
Bo1g138250 Brassica oleracea Bo1g138250 I 0.747
AMTR_s00068p00118480 Amborella trichopoda AMTR_s00068p00118480 I 0.746
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.743
evm.TU.supercontig_51.138 Carica papaya evm.TU.supercontig_51.138 I 0.741
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.738
Pm027048 Prunus mume Pm027048 I 0.738
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.732
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.731
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.731
MDP0000887107 Malus domestica MDP0000887107 I 0.727
MDP0000140609 Malus domestica MDP0000140609 I 0.727
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.725
mgf001865m Mimulus guttatus mgf001865m I 0.722
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.722
Bra027423 Brassica rapa Bra027423 I 0.719
ATMYB5 Arabidopsis lyrata scaffold_301556.1 I 0.718
cassava27189.m1 Manihot esculenta cassava27189.m1 I 0.718
Bostr.3640s0147 Boechera stricta Bostr.3640s0147 I 0.718
Thhalv10022057m.g Eutrema salsugineum Thhalv10022057m.g I 0.718
MYB5 Arabidopsis thaliana AT3G13540 I 0.718
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.716
MLOC_16037 Hordeum vulgare MLOC_16037 I 0.716
TRAES3BF026500080CFD_g Triticum aestivum TRAES3BF026500080CFD_g I 0.713
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.712
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.712
ORUFI01G30610 Oryza rufipogon ORUFI01G30610 I 0.711
BGIOSGA004260 Oryza indica BGIOSGA004260 I 0.711
OLONG_002608 Oryza longistaminata OLONG_002608 I 0.711
OS01G0695900 Oryza sativa OS01G0695900 I 0.711
ORGLA01G0227100 Oryza glaberrima ORGLA01G0227100 I 0.711
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.709
TCM_015933 Theobroma cacao TCM_015933 I 0.709
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.709
Pm023419 Prunus mume Pm023419 N 0.709
MTR_7g076740 Medicago truncatula MTR_7g076740 I 0.708
Cagra.0690s0007 Capsella grandiflora Cagra.0690s0007 I 0.708
Carubv10014443m.g Capsella rubella Carubv10014443m.g I 0.708
LPERR01G23630 Leersia perrieri LPERR01G23630 I 0.708
evm.TU.supercontig_51.139 Carica papaya evm.TU.supercontig_51.139 I 0.708
MDP0000143276 Malus domestica MDP0000143276 I 0.707
MDP0000133817 Malus domestica MDP0000133817 I 0.707
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.703
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.701
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.699
PK05754.1 Cannabis sativa PK05754.1 I 0.697
MTR_8g031360 Medicago truncatula MTR_8g031360 I 0.696
Ca_13779 Cicer arietinum Ca_13779 I 0.696
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.695
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.695
MDP0000226215 Malus domestica MDP0000226215 N 0.695
MDP0000253904 Malus domestica MDP0000253904 N 0.695
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.695
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.695
Cucsa.258270 Cucumis sativus Cucsa.258270 I 0.693
Cla021563 Citrullus lanatus Cla021563 I 0.693
MDP0000196982 Malus domestica MDP0000196982 I 0.692
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.690
GLYMA18G46480 Glycine max GLYMA18G46480 I 0.689
BRADI2G47367 Brachypodium distachyon BRADI2G47367 I 0.689
GLYMA09G39721 Glycine max GLYMA09G39721 I 0.689
MDP0000261265 Malus domestica MDP0000261265 I 0.688
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.688
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.688
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.688
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.688
Pm005577 Prunus mume Pm005577 I 0.688
Cla012784 Citrullus lanatus Cla012784 N 0.688
Lus10016413.g Linum usitatissimum Lus10016413.g I 0.687
30068.m002544 Ricinus communis 30068.m002544 I 0.687
Pm018056 Prunus mume Pm018056 I 0.686
PRUPE_ppa007268mg Prunus persica PRUPE_ppa007268mg I 0.686
Si004316m.g Setaria italica Si004316m.g I 0.686
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.685
TCM_037383 Theobroma cacao TCM_037383 I 0.685
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.685
Ca_06226 Cicer arietinum Ca_06226 I 0.684
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.684
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.684
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.684
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.683
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.683
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.683
MDP0000915330 Malus domestica MDP0000915330 I 0.683
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.683
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.683
PK14784.1 Cannabis sativa PK14784.1 I 0.683
Pm018338 Prunus mume Pm018338 I 0.683
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.683
TCM_005112 Theobroma cacao TCM_005112 I 0.683
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.682
Cla011528 Citrullus lanatus Cla011528 I 0.681
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.681
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.681
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.680
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.680
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.679
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.679
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.678
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.678
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.678
PDK_20s1554341g001 Phoenix dactylifera PDK_20s1554341g001 I 0.678
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.678
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.677
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.676
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.676
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.675
GLYMA03G01540 Glycine max GLYMA03G01540 I 0.675
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.674
MDP0000318013 Malus domestica MDP0000318013 I 0.674
MDP0000124555 Malus domestica MDP0000124555 N 0.674
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.674
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.674
Pm027047 Prunus mume Pm027047 I 0.674
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.673
TCM_037559 Theobroma cacao TCM_037559 I 0.673
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.673
Bra007588 Brassica rapa Bra007588 I 0.673
Ca_17627 Cicer arietinum Ca_17627 I 0.673
Bo8g095790 Brassica oleracea Bo8g095790 I 0.673
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.672
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.672
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.672
Ca_01329 Cicer arietinum Ca_01329 I 0.671
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.671
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.671
PRUPE_ppa015973mg Prunus persica PRUPE_ppa015973mg I 0.671
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.671
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.671
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.671
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.671
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.671
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.670
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.670
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.670
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.669
SapurV1A.0553s0090 Salix purpurea SapurV1A.0553s0090 I 0.669
TCM_015685 Theobroma cacao TCM_015685 I 0.669
TCM_029126 Theobroma cacao TCM_029126 N 0.669
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.668
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.668
TCM_029121 Theobroma cacao TCM_029121 I 0.667
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.667
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.666
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.666
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.666
PGSC0003DMG400005848 Solanum tuberosum PGSC0003DMG400005848 I 0.666
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.666
GLYMA07G07960 Glycine max GLYMA07G07960 I 0.666
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.666
Solyc08g082890.2 Solanum lycopersicum Solyc08g082890.2 I 0.665
gene19065-v1.0-hybrid Fragaria vesca gene19065-v1.0-hybrid I 0.665
PGSC0003DMG400012126 Solanum tuberosum PGSC0003DMG400012126 I 0.665
Pm024189 Prunus mume Pm024189 I 0.664
PRUPE_ppa018430mg Prunus persica PRUPE_ppa018430mg I 0.664
mgf015598m Mimulus guttatus mgf015598m I 0.664
mgf006108m Mimulus guttatus mgf006108m I 0.664
ATMYB2 Vitis vinifera VIT_07s0005g01950 I 0.664
Pm005571 Prunus mume Pm005571 I 0.664
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.664
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.664
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.664
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.664
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.663
Solyc08g008480.2 Solanum lycopersicum Solyc08g008480.2 I 0.663
TCM_000535 Theobroma cacao TCM_000535 I 0.663
30174.m009001 Ricinus communis 30174.m009001 I 0.663
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.662
MDP0000157940 Malus domestica MDP0000157940 I 0.662
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.662
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.662
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.662
VIT_16s0050g00070 Vitis vinifera VIT_16s0050g00070 I 0.662
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.662
MDP0000437717 Malus domestica MDP0000437717 I 0.661
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.661
Pm005573 Prunus mume Pm005573 I 0.661
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.661