Gorai.013G143000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G143000 T287820_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G143000.1 Myb 9 56
Gorai.013G143000.1 Myb 62 107

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.804
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.801
TCM_033015 Theobroma cacao TCM_033015 N 0.779
TCM_033016 Theobroma cacao TCM_033016 N 0.755
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.750
MDP0000289283 Malus domestica MDP0000289283 I 0.736
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.736
TCM_030020 Theobroma cacao TCM_030020 I 0.735
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.735
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.735
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.731
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.728
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.723
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.723
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.723
29933.m001454 Ricinus communis 29933.m001454 N 0.720
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.720
MDP0000131822 Malus domestica MDP0000131822 I 0.719
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.718
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.710
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.709
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.692
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.685
MDP0000407613 Malus domestica MDP0000407613 N 0.685
Pm009880 Prunus mume Pm009880 N 0.683
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.683
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.683
MDP0000155426 Malus domestica MDP0000155426 I 0.682
TCM_007865 Theobroma cacao TCM_007865 I 0.679
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.678
Pm015302 Prunus mume Pm015302 N 0.678
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.676
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.676
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.675
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.674
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.672
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.670
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.670
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.669
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.669
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.669
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.668
TCM_007868 Theobroma cacao TCM_007868 I 0.668
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.668
PK24260.1 Cannabis sativa PK24260.1 N 0.663
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.662
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.662
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.662
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.661