Gorai.013G143200 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G143200 T287822_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK28187.1
M01286_2.00
Cannabis sativa
TACCTACC

GGTAGGTA
PBM
Lambert et al.(2019)
pTH11305
0.673 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G143200.1 Myb 9 56
Gorai.013G143200.1 Myb 62 107

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.818
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.801
TCM_033015 Theobroma cacao TCM_033015 N 0.765
TCM_033016 Theobroma cacao TCM_033016 N 0.742
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.736
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.728
MDP0000289283 Malus domestica MDP0000289283 I 0.726
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.721
TCM_030020 Theobroma cacao TCM_030020 I 0.718
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.715
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.715
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.714
29933.m001454 Ricinus communis 29933.m001454 N 0.709
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.709
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.707
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.706
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.702
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.702
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.701
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.701
MDP0000131822 Malus domestica MDP0000131822 I 0.690
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.687
Pm009880 Prunus mume Pm009880 N 0.684
GSMUA_Achr6G31520_001 Musa acuminata GSMUA_Achr6G31520_001 I 0.681
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.680
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.678
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.677
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.677
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.676
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.676
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.676
TCM_030009 Theobroma cacao TCM_030009 I 0.676
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.676
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.676
Cla001360 Citrullus lanatus Cla001360 I 0.676
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.676
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.676
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.676
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.676
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.676
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.676
MDP0000155426 Malus domestica MDP0000155426 I 0.675
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.675
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.675
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.675
Bra038774 Brassica rapa Bra038774 I 0.674
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.674
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.673
mgf018114m Mimulus guttatus mgf018114m I 0.673
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.673
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.673
MDP0000492221 Malus domestica MDP0000492221 I 0.673
Pm009892 Prunus mume Pm009892 I 0.673
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.673
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.673
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N 0.673
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N 0.673
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.672
MDP0000407613 Malus domestica MDP0000407613 N 0.672
Cla019747 Citrullus lanatus Cla019747 I 0.672
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.672
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.672
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.672
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.672
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.672
Ca_00232 Cicer arietinum Ca_00232 I 0.672
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.672
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.672
Carubv10004873m.g Capsella rubella Carubv10004873m.g I 0.671
Bo3g162580 Brassica oleracea Bo3g162580 I 0.671
Pm015302 Prunus mume Pm015302 N 0.671
Cagra.2455s0004 Capsella grandiflora Cagra.2455s0004 I 0.671
ATMYB102 Arabidopsis lyrata fgenesh2_kg.7__2173__AT4G21440.1 I 0.671
Bostr.10689s0089 Boechera stricta Bostr.10689s0089 I 0.671
ATMYB102 Arabidopsis thaliana AT4G21440 I 0.671
Thhalv10027571m.g Eutrema salsugineum Thhalv10027571m.g I 0.671
Bra020892 Brassica rapa Bra020892 I 0.671
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.671
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.670
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.670
Bo7g107420 Brassica oleracea Bo7g107420 I 0.670
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.670
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.669
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.668
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.668
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.667
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.667
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.667
PK20358.1 Cannabis sativa PK20358.1 I 0.666
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.666
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.666
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.665
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.665
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.664
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.664
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.663
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.663
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.663
TCM_007865 Theobroma cacao TCM_007865 I 0.663
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.662
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.661
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.661
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.661
MTR_4g091490 Medicago truncatula MTR_4g091490 I 0.661
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.661
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.661