Lus10003001.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10003001.g T287871_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.661 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003001 Myb 17 66
Lus10003001 Myb 72 117

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10011031.g Linum usitatissimum Lus10011031.g N 0.838
Lus10040139.g Linum usitatissimum Lus10040139.g I 0.766
Lus10001093.g Linum usitatissimum Lus10001093.g I 0.766
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I 0.707
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I 0.704
Traes_5BL_30D8E6BE2 Triticum aestivum Traes_5BL_30D8E6BE2 I 0.686
Traes_5DL_0B2C5ADF6 Triticum aestivum Traes_5DL_0B2C5ADF6 I 0.686
F775_19511 Aegilops tauschii F775_19511 I 0.686
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.684
gw1.433.32.1 Physcomitrella patens gw1.433.32.1 I 0.683
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.678
MLOC_6696 Hordeum vulgare MLOC_6696 I 0.676
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.675
Ca_11494 Cicer arietinum Ca_11494 I 0.675
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.675
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.673
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.671
Bostr.25463s0081 Boechera stricta Bostr.25463s0081 I 0.669
GSMUA_Achr9G15640_001 Musa acuminata GSMUA_Achr9G15640_001 I 0.666
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.666
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I 0.665
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I 0.661
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.661
Carubv10007810m.g Capsella rubella Carubv10007810m.g I 0.661
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I 0.661