Lus10005245.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10005245.g T287886_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.809 0.882
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.809 0.882
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.806 0.849
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.806 0.849
ATY13
M07035_2.00
Arabidopsis thaliana
HAMCHMCCAMCHAHH

DDTDGKTGGKDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_col_a
0.802 0.860
ATY13
M07036_2.00
Arabidopsis thaliana
HAMCHHCCAACHAHH

DDTDGTTGGDDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_colamp_a
0.802 0.860
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.799 0.849
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.779 0.860
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.779 0.860
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10005245 Myb 14 61
Lus10005245 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

308 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Blimp-1 Drosophila melanogaster FBgn0035625 D 0.000
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I 0.000
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I 0.000
BTMF_0000836601 Brugia timori BTMF_0000836601 I 0.000
ASU_05469 Ascaris suum ASU_05469 I 0.000
PPAI008567 Phlebotomus papatasi PPAI008567 I 0.000
MDOA000384 Musca domestica MDOA000384 I 0.000
ASIS005657 Anopheles sinensis ASIS005657 I 0.000
AMEM000073 Anopheles merus AMEM000073 I 0.000
AMEC005588 Anopheles melas AMEC005588 I 0.000
AFUN002606 Anopheles funestus AFUN002606 I 0.000
AFAF006673 Anopheles farauti AFAF006673 I 0.000
ACUA020082 Anopheles culicifacies ACUA020082 I 0.000
ACOM039487 Anopheles coluzzii ACOM039487 I 0.000
AATE010559 Anopheles atroparvus AATE010559 I 0.000
LDEC016433 Leptinotarsa decemlineata LDEC016433 I 0.000
LCUP008191 Lucilia cuprina LCUP008191 I 0.000
HHAL002221-PA Halyomorpha halys HHAL002221-PA I 0.000
D917_07972 Trichinella nativa D917_07972 I 0.000
D918_01175 Trichuris suis D918_01175 I 0.000
DME_0000608401 Dracunculus medinensis DME_0000608401 I 0.000
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I 0.000
TCNE_0001220201 Toxocara canis TCNE_0001220201 I 0.000
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I 0.000
SVE_1713000 Strongyloides venezuelensis SVE_1713000 I 0.000
SSTP_0000757300 Strongyloides stercoralis SSTP_0000757300 I 0.000
SPAL_0000884500 Strongyloides papillosus SPAL_0000884500 I 0.000
SMUV_0001104401 Syphacia muris SMUV_0001104401 I 0.000
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I 0.000
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I 0.000
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I 0.000
L898_g18820 Steinernema monticolum L898_g18820 I 0.000
L893_g23908 Steinernema glaseri L893_g23908 I 0.000
L892_g2443 Steinernema scapterisci L892_g2443 I 0.000
L889_g7623 Steinernema feltiae L889_g7623 I 0.000
L596_g21750 Steinernema carpocapsae L596_g21750 I 0.000
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I 0.000
CLEC009125 Cimex lectularius CLEC009125 I 0.000
Cflo_04377--XP_391847.3_APIME Camponotus floridanus Cflo_04377--XP_391847.3_APIME I 0.000
GH16462 Drosophila grimshawi FBgn0123933 I 0.000
GG15278 Drosophila erecta FBgn0107530 I 0.000
EFV52614 Trichinella spiralis EFV52614 I 0.000
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I 0.000
CPIJ007425 Culex quinquefasciatus CPIJ007425 I 0.000
CGI_10024223 Crassostrea gigas CGI_10024223 I 0.000
CapteG226252 Capitella teleta CapteG226252 I 0.000
Bm3574 Brugia malayi Bm3574 I 0.000
BGIBMGA000319 Bombyx mori BGIBMGA000319 I 0.000
AGAP006592 Anopheles gambiae AGAP006592 I 0.000
ADAC005262 Anopheles darlingi ADAC005262 I 0.000
ACYPI000849 Acyrthosiphon pisum ACYPI000849 I 0.000
ACEP26221 Atta cephalotes ACEP26221 I 0.000
AAEL013770 Aedes aegypti AAEL013770 I 0.000
AAEL004255 Aedes aegypti AAEL004255 I 0.000
WUBG_04696 Wuchereria bancrofti WUBG_04696 I 0.000
GM14713 Drosophila sechellia FBgn0169634 I 0.000
GJ13412 Drosophila virilis FBgn0200637 I 0.000
GK17303 Drosophila willistoni FBgn0219302 I 0.000
WBGene00238199 Onchocerca volvulus WBGene00238199 I 0.000
TC014741 Tribolium castaneum TC014741 I 0.000
SMAR011793 Strigamia maritima SMAR011793 I 0.000
SINV14078 Solenopsis invicta SINV14078 I 0.000
RPRC001983 Rhodnius prolixus RPRC001983 I 0.000
PHUM607020 Pediculus humanus PHUM607020 I 0.000
NV12817 Nasonia vitripennis NV12817 I 0.000
MCINX009345 Melitaea cinxia MCINX009345 I 0.000
LotgiG86198 Lottia gigantea LotgiG86198 I 0.000
LOAG_11444 Loa loa LOAG_11444 I 0.000
L798_14234 Zootermopsis nevadensis L798_14234 I 0.000
KGM_16647 Danaus plexippus KGM_16647 I 0.000
HMEL007072 Heliconius melpomene HMEL007072 I 0.000
GB51060 Apis mellifera GB51060 I 0.000
GA23469 Drosophila pseudoobscura FBgn0244871 I 0.000
GE21501 Drosophila yakuba FBgn0238758 I 0.000
CpipJ_CPIJ007425 Culex pipiens CpipJ_CPIJ007425 I 0.000