CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10005340.g
(
Linum usitatissimum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Lus10005340.g
T287888_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR10
M02702_2.00
Arabidopsis thaliana
AGATHYKN
NMRDATCT
SELEX
Mathelier et al.(2014)
MA0121.1
0.797
0.809
ARR10
M11045_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ARR10_01
0.797
0.809
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.747
0.851
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.745
0.851
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10005340
Myb
197
247
RVVWSVELHRKFVSAVNHLGVDKAVPKKILDLMNVEKLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Linum usitatissimum
TFs
308 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy