Lus10007503.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10007503.g T287908_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB73
M07114_2.00
Arabidopsis thaliana
TAACBGWHWHW

WDWDWCVGTTA
Dap-seq
OMalley et al.(2016)
MYB73_col_a
0.695 0.774
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY

RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.690 0.774
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.690 0.763
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN

NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.690 0.763
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.689 0.731
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.689 0.731
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.689 0.731
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.686 0.753
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.679 0.731
F3A4.140
M02299_2.00
Arabidopsis thaliana
YAACBGYY

RRCVGTTR
PBM
Weirauch et al.(2014)
pTH7112
0.666 0.720
F3A4.140
M07095_2.00
Arabidopsis thaliana
TAACBGYHWHNNHNN

NNDNNDWDRCVGTTA
Dap-seq
OMalley et al.(2016)
MYB77_col_a
0.666 0.720
F3A4.140
M07096_2.00
Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV

BKTWWDWTASGGTTRCGGTT
Dap-seq
OMalley et al.(2016)
MYB77_colamp_a
0.666 0.720
F3A4.140
M02701_2.00
Arabidopsis thaliana
SYAACYGYCVHBN

NVDBGRCRGTTRS
SELEX
Mathelier et al.(2014)
MA0575.1
0.666 0.720
F3A4.140
M11044_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB77_01
0.666 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10007503 Myb 13 59
Lus10007503 Myb 65 110

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

312 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA027579 Oryza indica BGIOSGA027579 N 0.000
BRADI3G15880 Brachypodium distachyon BRADI3G15880 N 0.000
F775_29092 Aegilops tauschii F775_29092 N 0.000
GRMZM2G022359 Zea mays GRMZM2G022359 N 0.000
LPERR08G04150 Leersia perrieri LPERR08G04150 N 0.000
MLOC_71599 Hordeum vulgare MLOC_71599 N 0.000
OB08G14470 Oryza brachyantha OB08G14470 N 0.000
OGLUM08G04530 Oryza glumaepatula OGLUM08G04530 N 0.000
OMERI08G04370 Oryza meridionalis OMERI08G04370 N 0.000
ONIVA08G04140 Oryza nivara ONIVA08G04140 N 0.000
OPUNC08G04240 Oryza punctata OPUNC08G04240 N 0.000
ORGLA08G0037300 Oryza glaberrima ORGLA08G0037300 N 0.000
ORUFI08G04760 Oryza rufipogon ORUFI08G04760 N 0.000
Pavir.Ca00106 Panicum virgatum Pavir.Ca00106 N 0.000
Pavir.Cb02104 Panicum virgatum Pavir.Cb02104 N 0.000
Sb07g004580 Sorghum bicolor Sb07g004580 N 0.000
Si010747m.g Setaria italica Si010747m.g N 0.000
Si026706m.g Setaria italica Si026706m.g N 0.000
Traes_7DL_AF3F7B5B2 Triticum aestivum Traes_7DL_AF3F7B5B2 N 0.000
TRIUR3_34177 Triticum urartu TRIUR3_34177 N 0.000