Lus10010974.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10010974.g T287941_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.715 0.793
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY

RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.715 0.783
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10010974 Myb 14 61
Lus10010974 Myb 68 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

206 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr5G05910_001 Musa acuminata GSMUA_Achr5G05910_001 I 0.745
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.741
OPUNC08G12780 Oryza punctata OPUNC08G12780 I 0.737
BGIOSGA028709 Oryza indica BGIOSGA028709 I 0.734
ORGLA08G0134400 Oryza glaberrima ORGLA08G0134400 I 0.734
GLYMA11G33620 Glycine max GLYMA11G33620 I 0.732
Eucgr.F02864 Eucalyptus grandis Eucgr.F02864 I 0.732
GLYMA02G41180 Glycine max GLYMA02G41180 I 0.732
GLYMA18G04580 Glycine max GLYMA18G04580 I 0.732
GLYMA14G39530 Glycine max GLYMA14G39530 I 0.732
Cucsa.006170 Cucumis sativus Cucsa.006170 I 0.732
Eucgr.J01601 Eucalyptus grandis Eucgr.J01601 I 0.732
MTR_5g078140 Medicago truncatula MTR_5g078140 I 0.732
TCM_019116 Theobroma cacao TCM_019116 I 0.732
PRUPE_ppa009966mg Prunus persica PRUPE_ppa009966mg I 0.732
Ca_13286 Cicer arietinum Ca_13286 I 0.732
Cla009311 Citrullus lanatus Cla009311 I 0.732
MTR_3g065440 Medicago truncatula MTR_3g065440 I 0.732
Pm013020 Prunus mume Pm013020 I 0.732
cassava6251.valid.m1 Manihot esculenta cassava6251.valid.m1 I 0.732
Ciclev10012265m.g Citrus clementina Ciclev10012265m.g I 0.732
orange1.1g021498m.g Citrus sinensis orange1.1g021498m.g I 0.732
Lus10004043.g Linum usitatissimum Lus10004043.g I 0.731
Lus10002296.g Linum usitatissimum Lus10002296.g I 0.731
Gorai.001G205300 Gossypium raimondii Gorai.001G205300 I 0.729
cassava30009.valid.m1 Manihot esculenta cassava30009.valid.m1 I 0.729
Gorai.008G060100 Gossypium raimondii Gorai.008G060100 I 0.724
Sb10g009330 Sorghum bicolor Sb10g009330 I 0.723
GRMZM2G048910 Zea mays GRMZM2G048910 I 0.723
GSMUA_Achr5G23110_001 Musa acuminata GSMUA_Achr5G23110_001 I 0.715
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I 0.715
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I 0.715
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I 0.715
MYB43 Vitis vinifera VIT_14s0006g00450 I 0.715
MYB43 Arabidopsis lyrata scaffold_601700.1 I 0.715
MYB20 Arabidopsis lyrata scaffold_201335.1 I 0.715
PK21166.1 Cannabis sativa PK21166.1 D 0.715
Traes_7DS_5100A9609 Triticum aestivum Traes_7DS_5100A9609 I 0.715
Thhalv10019852m.g Eutrema salsugineum Thhalv10019852m.g I 0.715
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I 0.715
MYB43 Arabidopsis thaliana AT5G16600 D 0.715
MLOC_14021 Hordeum vulgare MLOC_14021 I 0.715
F775_29159 Aegilops tauschii F775_29159 I 0.715
gene30520-v1.0-hybrid Fragaria vesca gene30520-v1.0-hybrid I 0.715
Bo9g163020 Brassica oleracea Bo9g163020 I 0.715
Carubv10001378m.g Capsella rubella Carubv10001378m.g I 0.715
ORUFI06G10280 Oryza rufipogon ORUFI06G10280 I 0.714
BGIOSGA022649 Oryza indica BGIOSGA022649 I 0.714
OB06G19130 Oryza brachyantha OB06G19130 I 0.714
ORGLA06G0093500 Oryza glaberrima ORGLA06G0093500 I 0.714
OS06G0258000 Oryza sativa OS06G0258000 I 0.714
Cagra.1300s0004 Capsella grandiflora Cagra.1300s0004 I 0.712
Bo6g099800 Brassica oleracea Bo6g099800 I 0.712
Lus10027197.g Linum usitatissimum Lus10027197.g I 0.712
Bra004155 Brassica rapa Bra004155 I 0.712
Bostr.26959s0295 Boechera stricta Bostr.26959s0295 I 0.712
Bo2g013190 Brassica oleracea Bo2g013190 I 0.712
Carubv10020766m.g Capsella rubella Carubv10020766m.g I 0.712
Pavir.Db01743 Panicum virgatum Pavir.Db01743 I 0.712
BRADI3G36370 Brachypodium distachyon BRADI3G36370 I 0.711
MYB20 Arabidopsis thaliana AT1G66230 I 0.710
Sb02g024250 Sorghum bicolor Sb02g024250 I 0.708
Cucsa.375180 Cucumis sativus Cucsa.375180 I 0.707
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I 0.706
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I 0.706
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I 0.706
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I 0.706
TCM_016054 Theobroma cacao TCM_016054 I 0.706
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I 0.706
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I 0.706
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.706
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I 0.706
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I 0.706
cassava33331.m1 Manihot esculenta cassava33331.m1 I 0.706
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I 0.706
Cla011736 Citrullus lanatus Cla011736 I 0.706
Pm023573 Prunus mume Pm023573 I 0.706
30190.m011004 Ricinus communis 30190.m011004 I 0.706
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I 0.706
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I 0.706
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I 0.706
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.706
OB09G16260 Oryza brachyantha OB09G16260 I 0.706
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I 0.706
GLYMA17G14291 Glycine max GLYMA17G14291 I 0.706
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I 0.706
TCM_014956 Theobroma cacao TCM_014956 I 0.703
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.703
Cucsa.115620 Cucumis sativus Cucsa.115620 I 0.703
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.703
Eucgr.K00153 Eucalyptus grandis Eucgr.K00153 I 0.703
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.703
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.703
gene21264-v1.0-hybrid Fragaria vesca gene21264-v1.0-hybrid I 0.703
POPTR_0012s14540 Populus trichocarpa POPTR_0012s14540 I 0.703
cassava47045.m1 Manihot esculenta cassava47045.m1 I 0.703
Cla003626 Citrullus lanatus Cla003626 I 0.703
Ca_08722 Cicer arietinum Ca_08722 I 0.702
SapurV1A.0390s0060 Salix purpurea SapurV1A.0390s0060 I 0.702
MTR_4g102380 Medicago truncatula MTR_4g102380 I 0.702
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I 0.702
PK08857.1 Cannabis sativa PK08857.1 I 0.702
POPTR_0017s02850 Populus trichocarpa POPTR_0017s02850 I 0.702
POPTR_0004s08480 Populus trichocarpa POPTR_0004s08480 I 0.702
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I 0.702
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I 0.702
MDP0000682032 Malus domestica MDP0000682032 I 0.702
ORGLA02G0269000 Oryza glaberrima ORGLA02G0269000 I 0.701
GRMZM2G126566 Zea mays GRMZM2G126566 I 0.701
GRMZM2G055158 Zea mays GRMZM2G055158 I 0.701
Pavir.Aa00435 Panicum virgatum Pavir.Aa00435 I 0.701
OGLUM02G32070 Oryza glumaepatula OGLUM02G32070 I 0.701
OB08G22860 Oryza brachyantha OB08G22860 I 0.701
OB02G38450 Oryza brachyantha OB02G38450 I 0.701
Sb04g028850 Sorghum bicolor Sb04g028850 I 0.701
Si020225m.g Setaria italica Si020225m.g I 0.701
OS02G0732600 Oryza sativa OS02G0732600 I 0.701
ORUFI02G33090 Oryza rufipogon ORUFI02G33090 I 0.701
BGIOSGA005676 Oryza indica BGIOSGA005676 I 0.701
Si014144m.g Setaria italica Si014144m.g I 0.700
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I 0.699
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I 0.699
Si007017m.g Setaria italica Si007017m.g I 0.698
Lus10004042.g Linum usitatissimum Lus10004042.g I 0.698
ORGLA09G0071400 Oryza glaberrima ORGLA09G0071400 I 0.697
OS09G0401000 Oryza sativa OS09G0401000 I 0.697
Pavir.Ba02148 Panicum virgatum Pavir.Ba02148 I 0.697
BGIOSGA030727 Oryza indica BGIOSGA030727 I 0.697
Pavir.Bb01872 Panicum virgatum Pavir.Bb01872 I 0.697
GRMZM2G169356 Zea mays GRMZM2G169356 I 0.697
ORUFI09G10320 Oryza rufipogon ORUFI09G10320 I 0.697
Bra013633 Brassica rapa Bra013633 I 0.696
Bo3g107740 Brassica oleracea Bo3g107740 I 0.693
MLOC_50944 Hordeum vulgare MLOC_50944 I 0.693
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I 0.693
Bra019368 Brassica rapa Bra019368 I 0.692
Cagra.6652s0005 Capsella grandiflora Cagra.6652s0005 I 0.692
Bo7g108060 Brassica oleracea Bo7g108060 I 0.692
Bo1g028520 Brassica oleracea Bo1g028520 I 0.692
Carubv10005483m.g Capsella rubella Carubv10005483m.g I 0.692
MYB85 Arabidopsis lyrata fgenesh2_kg.7__2034__AT4G22680.1 I 0.692
Bostr.7867s0052 Boechera stricta Bostr.7867s0052 I 0.692
MYB85 Arabidopsis thaliana AT4G22680 I 0.692
Pavir.Ab02913 Panicum virgatum Pavir.Ab02913 I 0.691
Pavir.Fb01563 Panicum virgatum Pavir.Fb01563 I 0.691
mgf017719m Mimulus guttatus mgf017719m I 0.689
Cucsa.302180 Cucumis sativus Cucsa.302180 I 0.689
Sb02g024260 Sorghum bicolor Sb02g024260 I 0.689
Lus10024589.g Linum usitatissimum Lus10024589.g I 0.689
Lus10032226.g Linum usitatissimum Lus10032226.g I 0.689
GLYMA11G03300 Glycine max GLYMA11G03300 I 0.689
MYB42 Arabidopsis thaliana AT4G12350 I 0.689
cassava21367.m1 Manihot esculenta cassava21367.m1 I 0.688
Pavir.Fa00850 Panicum virgatum Pavir.Fa00850 I 0.688
Lus10038913.g Linum usitatissimum Lus10038913.g I 0.687
SapurV1A.0102s0470 Salix purpurea SapurV1A.0102s0470 I 0.686
SapurV1A.0129s0270 Salix purpurea SapurV1A.0129s0270 I 0.686
SapurV1A.1318s0060 Salix purpurea SapurV1A.1318s0060 I 0.686
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.686
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I 0.685
F775_17058 Aegilops tauschii F775_17058 I 0.684
TRIUR3_16495 Triticum urartu TRIUR3_16495 I 0.684
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I 0.684
AMTR_s00091p00025820 Amborella trichopoda AMTR_s00091p00025820 I 0.683
Thhalv10027281m.g Eutrema salsugineum Thhalv10027281m.g I 0.681
Pavir.Ba02149 Panicum virgatum Pavir.Ba02149 I 0.681
Gorai.006G064000 Gossypium raimondii Gorai.006G064000 I 0.681
Traes_5BL_D85C0EF26 Triticum aestivum Traes_5BL_D85C0EF26 I 0.680
Traes_5DL_46D39C394 Triticum aestivum Traes_5DL_46D39C394 I 0.680
F775_13107 Aegilops tauschii F775_13107 I 0.680
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I 0.679
Pavir.Fb02321 Panicum virgatum Pavir.Fb02321 I 0.678
Sb02g030900 Sorghum bicolor Sb02g030900 I 0.678
Pavir.J36915 Panicum virgatum Pavir.J36915 I 0.678
GRMZM2G138427 Zea mays GRMZM2G138427 I 0.678
GRMZM2G104551 Zea mays GRMZM2G104551 I 0.678
GRMZM2G037650 Zea mays GRMZM2G037650 I 0.678
GSMUA_Achr10G29970_001 Musa acuminata GSMUA_Achr10G29970_001 I 0.677
Carubv10003172m.g Capsella rubella Carubv10003172m.g I 0.676
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I 0.676
BGIOSGA026529 Oryza indica BGIOSGA026529 I 0.675
BGIOSGA029380 Oryza indica BGIOSGA029380 I 0.675
OLONG_005336 Oryza longistaminata OLONG_005336 I 0.675
ORGLA08G0217800 Oryza glaberrima ORGLA08G0217800 I 0.675
OS09G0532900 Oryza sativa OS09G0532900 I 0.675
ORUFI08G25210 Oryza rufipogon ORUFI08G25210 I 0.675
ORGLA09G0137500 Oryza glaberrima ORGLA09G0137500 I 0.675
OB08G29480 Oryza brachyantha OB08G29480 I 0.675
OB09G24070 Oryza brachyantha OB09G24070 I 0.675
MDP0000602739 Malus domestica MDP0000602739 I 0.675
LPERR08G19430 Leersia perrieri LPERR08G19430 I 0.675
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I 0.673
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I 0.673
BRADI3G42430 Brachypodium distachyon BRADI3G42430 I 0.672
GSMUA_Achr9G15640_001 Musa acuminata GSMUA_Achr9G15640_001 I 0.669
Gorai.006G195700 Gossypium raimondii Gorai.006G195700 I 0.667
Pavir.J21364 Panicum virgatum Pavir.J21364 I 0.667
BRADI4G29796 Brachypodium distachyon BRADI4G29796 I 0.667
MYB99 Arabidopsis lyrata scaffold_802887.1 I 0.666
Sb07g024970 Sorghum bicolor Sb07g024970 I 0.666
GSMUA_Achr1G18610_001 Musa acuminata GSMUA_Achr1G18610_001 I 0.665
MDP0000787808 Malus domestica MDP0000787808 I 0.663
Thhalv10004868m.g Eutrema salsugineum Thhalv10004868m.g I 0.663
PRUPE_ppa011549mg Prunus persica PRUPE_ppa011549mg I 0.662
Si015412m.g Setaria italica Si015412m.g I 0.662
Pm019472 Prunus mume Pm019472 I 0.662