Lus10012092.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10012092.g T287953_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.733 0.809
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.733 0.809
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.733 0.809
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.733 0.809
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.688 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10012092 Myb 5 57

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10025203.g Linum usitatissimum Lus10025203.g I 0.909
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I 0.825
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I 0.825
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I 0.825
OLONG_011068 Oryza longistaminata OLONG_011068 I 0.801
OS01G0589300 Oryza sativa OS01G0589300 I 0.801
LPERR01G18090 Leersia perrieri LPERR01G18090 I 0.801
OMERI01G19490 Oryza meridionalis OMERI01G19490 I 0.801
OBART01G21150 Oryza barthii OBART01G21150 I 0.801
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I 0.801
OMERI01G19510 Oryza meridionalis OMERI01G19510 I 0.801
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I 0.801
BGIOSGA003871 Oryza indica BGIOSGA003871 I 0.801
ONIVA01G23780 Oryza nivara ONIVA01G23780 I 0.801
OPUNC01G21220 Oryza punctata OPUNC01G21220 I 0.801
29661.m000926 Ricinus communis 29661.m000926 I 0.785
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.785
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I 0.777
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I 0.777
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I 0.777
TCM_000807 Theobroma cacao TCM_000807 I 0.777
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I 0.777
Lus10011546.g Linum usitatissimum Lus10011546.g I 0.767
OB01G30760 Oryza brachyantha OB01G30760 I 0.767
Lus10019260.g Linum usitatissimum Lus10019260.g I 0.767
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I 0.751
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I 0.751
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I 0.743
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I 0.743
Bra024438 Brassica rapa Bra024438 I 0.743
Carubv10026874m.g Capsella rubella Carubv10026874m.g I 0.743
Bo3g096520 Brassica oleracea Bo3g096520 I 0.743
Bo9g019040 Brassica oleracea Bo9g019040 I 0.743
Bra037839 Brassica rapa Bra037839 I 0.743
Bra037837 Brassica rapa Bra037837 I 0.743
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I 0.743
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I 0.733
TRB2 Arabidopsis thaliana AT5G67580 D 0.733
MTR_5g015340 Medicago truncatula MTR_5g015340 I 0.727
Carubv10017722m.g Capsella rubella Carubv10017722m.g I 0.725
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I 0.725
Bo1g081300 Brassica oleracea Bo1g081300 I 0.725
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I 0.725
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I 0.725
Bra029978 Brassica rapa Bra029978 I 0.725
TRB3 Arabidopsis thaliana AT3G49850 I 0.725
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I 0.725
OS12G0613300 Oryza sativa OS12G0613300 I 0.724
OB12G25520 Oryza brachyantha OB12G25520 I 0.724
OBART12G18680 Oryza barthii OBART12G18680 I 0.724
BGIOSGA035841 Oryza indica BGIOSGA035841 I 0.724
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I 0.724
OLONG_008332 Oryza longistaminata OLONG_008332 I 0.724
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I 0.724
OPUNC12G16890 Oryza punctata OPUNC12G16890 I 0.724
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I 0.724
ONIVA12G17630 Oryza nivara ONIVA12G17630 I 0.724
Pavir.J27218 Panicum virgatum Pavir.J27218 I 0.717
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I 0.717
Si002403m.g Setaria italica Si002403m.g I 0.717
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I 0.717
Lus10030935.g Linum usitatissimum Lus10030935.g I 0.710
Lus10040111.g Linum usitatissimum Lus10040111.g I 0.710
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I 0.707
TRIUR3_08672 Triticum urartu TRIUR3_08672 I 0.707
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I 0.707
Sb03g026470 Sorghum bicolor Sb03g026470 I 0.707
GRMZM2G087817 Zea mays GRMZM2G087817 I 0.707
GRMZM2G136887 Zea mays GRMZM2G136887 I 0.707
Lus10027621.g Linum usitatissimum Lus10027621.g I 0.703
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.703
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.703
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.703
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.703
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.703
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.703
OMERI12G14000 Oryza meridionalis OMERI12G14000 I 0.702
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.696
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.688
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.688
Cla014248 Citrullus lanatus Cla014248 I 0.688
MDP0000239354 Malus domestica MDP0000239354 I 0.688
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.688
Ca_09355 Cicer arietinum Ca_09355 I 0.688
Ca_02232 Cicer arietinum Ca_02232 I 0.688
Pm002374 Prunus mume Pm002374 I 0.688
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.688
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.688
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.688
PK06103.1 Cannabis sativa PK06103.1 D 0.688
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.688
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.688
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.688
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.688
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I 0.685
mgf011386m Mimulus guttatus mgf011386m I 0.684
29912.m005376 Ricinus communis 29912.m005376 I 0.682
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I 0.682
Aquca_001_00028 Aquilegia coerulea Aquca_001_00028 I 0.682
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I 0.682
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.681
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.681
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.681
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.681
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.681
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.681
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.681
29812.m000204 Ricinus communis 29812.m000204 I 0.681
Pm021139 Prunus mume Pm021139 I 0.681
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.681
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I 0.678
Solyc01g106940.2 Solanum lycopersicum Solyc01g106940.2 I 0.678
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.675
POPTR_0018s07040 Populus trichocarpa POPTR_0018s07040 I 0.669
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.668
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.668
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.663
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.663
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.663
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.662
Bo5g077530 Brassica oleracea Bo5g077530 I 0.662
Bra039650 Brassica rapa Bra039650 I 0.662
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.662