Lus10014569.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10014569.g T287977_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB40
M07126_2.00
Arabidopsis thaliana
YYYACCWAMYHHH

DDDRKTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB40_col_a
0.733 0.817
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.678 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10014569 Myb 14 61
Lus10014569 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10032117.g Linum usitatissimum Lus10032117.g I 0.864
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I 0.862
mgf018940m Mimulus guttatus mgf018940m I 0.858
AtMYB40 Vitis vinifera VIT_14s0219g00050 I 0.858
TCM_017051 Theobroma cacao TCM_017051 I 0.856
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I 0.856
cassava17364.m1 Manihot esculenta cassava17364.m1 I 0.850
cassava3745.m1 Manihot esculenta cassava3745.m1 I 0.843
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I 0.842
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I 0.838
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I 0.837
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I 0.835
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I 0.835
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I 0.831
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I 0.831
29929.m004749 Ricinus communis 29929.m004749 I 0.826
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I 0.825
MDP0000241111 Malus domestica MDP0000241111 I 0.824
MDP0000303239 Malus domestica MDP0000303239 I 0.824
Ca_19393 Cicer arietinum Ca_19393 I 0.824
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I 0.822
Pm015564 Prunus mume Pm015564 I 0.820
Cucsa.156340 Cucumis sativus Cucsa.156340 I 0.814
Cla004104 Citrullus lanatus Cla004104 I 0.814
GLYMA16G06900 Glycine max GLYMA16G06900 I 0.811
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I 0.802
GLYMA19G07830 Glycine max GLYMA19G07830 I 0.797
SapurV1A.0136s0070 Salix purpurea SapurV1A.0136s0070 I 0.795
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I 0.785
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I 0.785
GLYMA05G06410 Glycine max GLYMA05G06410 I 0.782
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.779
cassava15064.m1 Manihot esculenta cassava15064.m1 I 0.779
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I 0.769
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I 0.767
Bra006249 Brassica rapa Bra006249 I 0.753
Bra008764 Brassica rapa Bra008764 I 0.753
Bo3g009730 Brassica oleracea Bo3g009730 I 0.753
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I 0.747
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I 0.747
Bo9g166000 Brassica oleracea Bo9g166000 I 0.744
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N 0.741
mgf025004m Mimulus guttatus mgf025004m I 0.739
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I 0.733
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I 0.733
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I 0.733
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.733
AtMYB40 Populus trichocarpa POPTR_0008s18110 I 0.725
Bo4g101470 Brassica oleracea Bo4g101470 I 0.700
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I 0.684
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I 0.684
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I 0.684
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I 0.678
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I 0.678
Carubv10001378m.g Capsella rubella Carubv10001378m.g I 0.678
MYB43 Arabidopsis lyrata scaffold_601700.1 I 0.678
MYB43 Arabidopsis thaliana AT5G16600 D 0.678
Pavir.J21364 Panicum virgatum Pavir.J21364 I 0.673
Pavir.Bb01873 Panicum virgatum Pavir.Bb01873 I 0.673
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I 0.671
MTR_4g102380 Medicago truncatula MTR_4g102380 I 0.670
PK08857.1 Cannabis sativa PK08857.1 I 0.670
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I 0.670
Ca_08722 Cicer arietinum Ca_08722 I 0.670
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I 0.667
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I 0.666
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I 0.666
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.666
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I 0.666
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I 0.666
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I 0.666
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I 0.666
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I 0.666
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I 0.666
Lus10027197.g Linum usitatissimum Lus10027197.g I 0.666
Lus10038913.g Linum usitatissimum Lus10038913.g I 0.666
MDP0000682032 Malus domestica MDP0000682032 I 0.666
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I 0.666
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I 0.666
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I 0.666
TCM_014956 Theobroma cacao TCM_014956 I 0.666
TCM_016054 Theobroma cacao TCM_016054 I 0.666
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.666
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I 0.666
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I 0.666
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.666
GLYMA17G14291 Glycine max GLYMA17G14291 I 0.666
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I 0.666
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I 0.666
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.666
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I 0.666
Cla003626 Citrullus lanatus Cla003626 I 0.666
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.666
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I 0.666
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.666
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I 0.666
Carubv10003172m.g Capsella rubella Carubv10003172m.g I 0.666
Cla011736 Citrullus lanatus Cla011736 I 0.666
cassava47045.m1 Manihot esculenta cassava47045.m1 I 0.666
Pm023573 Prunus mume Pm023573 I 0.666
cassava33331.m1 Manihot esculenta cassava33331.m1 I 0.666
30190.m011004 Ricinus communis 30190.m011004 I 0.666
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I 0.661
Bo2g013190 Brassica oleracea Bo2g013190 I 0.661
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I 0.661
Bo9g163020 Brassica oleracea Bo9g163020 I 0.661