CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10018546.g
(
Linum usitatissimum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Lus10018546.g
T288011_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10018546
Myb
14
61
KGTWTPEEDMRLAAYISRYGCRNWRRLPEDAGLKRCGKSCRLRWLNYL
Lus10018546
Myb
67
112
RGGFTKDEEATILALHEKLGNKWSIIATHMSGRTDNEIKNLWNTHL
Links
Other
Myb/SANT
family TFs
Other
Linum usitatissimum
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10039771.g
Linum usitatissimum
Lus10039771.g
N
0.855
Lus10039772.g
Linum usitatissimum
Lus10039772.g
N
0.760
Lus10018547.g
Linum usitatissimum
Lus10018547.g
N
0.747
MDP0000155426
Malus domestica
MDP0000155426
I
0.734
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
0.719
MDP0000407613
Malus domestica
MDP0000407613
N
0.717
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
0.715
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.708
MTR_2g089450
Medicago truncatula
MTR_2g089450
N
0.707
evm.TU.supercontig_34.62
Carica papaya
evm.TU.supercontig_34.62
N
0.704
TCM_007865
Theobroma cacao
TCM_007865
I
0.704
gene01998-v1.0-hybrid
Fragaria vesca
gene01998-v1.0-hybrid
N
0.702
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
0.700
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
0.700
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
0.694
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
0.694
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
0.694
PK24260.1
Cannabis sativa
PK24260.1
N
0.690
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
0.687
Pm015302
Prunus mume
Pm015302
N
0.687
GLYMA06G45554
Glycine max
GLYMA06G45554
I
0.687
Lus10033738.g
Linum usitatissimum
Lus10033738.g
N
0.686
Lus10031607.g
Linum usitatissimum
Lus10031607.g
N
0.682
GLYMA06G45547
Glycine max
GLYMA06G45547
N
0.680
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
0.676
gene30736-v1.0-hybrid
Fragaria vesca
gene30736-v1.0-hybrid
N
0.673
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
0.668
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
0.667
evm.TU.supercontig_27.156
Carica papaya
evm.TU.supercontig_27.156
N
0.665
ORGLA04G0202400
Oryza glaberrima
ORGLA04G0202400
I
0.664
ORUFI04G25410
Oryza rufipogon
ORUFI04G25410
I
0.664
OPUNC04G21230
Oryza punctata
OPUNC04G21230
I
0.664
ONIVA04G19740
Oryza nivara
ONIVA04G19740
I
0.664
OMERI04G19570
Oryza meridionalis
OMERI04G19570
I
0.664
OS04G0594100
Oryza sativa
OS04G0594100
I
0.664
Sb06g027180
Sorghum bicolor
Sb06g027180
I
0.664
OB04G30570
Oryza brachyantha
OB04G30570
I
0.664
OGLUM04G23630
Oryza glumaepatula
OGLUM04G23630
I
0.664
BGIOSGA014440
Oryza indica
BGIOSGA014440
I
0.664
Si010384m.g
Setaria italica
Si010384m.g
I
0.664
OBART04G23680
Oryza barthii
OBART04G23680
I
0.664