Lus10030452.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10030452.g T288123_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.800 0.914
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.800 0.914
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.774 0.806
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.774 0.806
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.742 0.763
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.742 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10030452 Myb 73 119
Lus10030452 Myb 125 170

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI53104 Acyrthosiphon pisum ACYPI53104 N 0.000
AAEL000826 Aedes aegypti AAEL000826 N 0.000
AALB009100 Anopheles albimanus AALB009100 N 0.000
AATE013995 Anopheles atroparvus AATE013995 N 0.000
ACOM037336 Anopheles coluzzii ACOM037336 N 0.000
ADAC004556 Anopheles darlingi ADAC004556 N 0.000
AGAP002993 Anopheles gambiae AGAP002993 N 0.000
AMEC003748 Anopheles melas AMEC003748 N 0.000
AMEM008468 Anopheles merus AMEM008468 N 0.000
ASIS014267 Anopheles sinensis ASIS014267 N 0.000
ASTEI03270 Anopheles stephensi ASTEI03270 N 0.000
GB48806 Apis mellifera GB48806 N 0.000
BGIBMGA002168 Bombyx mori BGIBMGA002168 N 0.000
Cflo_05366--XP_001120155.1_APIME Camponotus floridanus Cflo_05366--XP_001120155.1_APIME N 0.000
CLEC004985 Cimex lectularius CLEC004985 N 0.000
CpipJ_CPIJ019621 Culex pipiens CpipJ_CPIJ019621 N 0.000
CPIJ019621 Culex quinquefasciatus CPIJ019621 N 0.000
KGM_06311 Danaus plexippus KGM_06311 N 0.000
DAPPUDRAFT_196639 Daphnia pulex DAPPUDRAFT_196639 N 0.000
GF17275 Drosophila ananassae FBgn0094293 N 0.000
GG17407 Drosophila erecta FBgn0109633 N 0.000
GH18583 Drosophila grimshawi FBgn0126050 N 0.000
CG11966 Drosophila melanogaster FBgn0037645 N 0.000
GI24513 Drosophila mojavensis FBgn0147235 N 0.000
GL21645 Drosophila persimilis FBgn0159238 N 0.000
GA11300 Drosophila pseudoobscura FBgn0071354 N 0.000
GM26297 Drosophila sechellia FBgn0181151 N 0.000
GJ22686 Drosophila virilis FBgn0209790 N 0.000
GK11210 Drosophila willistoni FBgn0213221 N 0.000
GE24811 Drosophila yakuba FBgn0241912 N 0.000
HHAL008764-PA Halyomorpha halys HHAL008764-PA N 0.000
HMEL015339 Heliconius melpomene HMEL015339 N 0.000
LDEC005984 Leptinotarsa decemlineata LDEC005984 N 0.000
LCUP004423 Lucilia cuprina LCUP004423 N 0.000
MCINX001754 Melitaea cinxia MCINX001754 N 0.000
MDOA010621 Musca domestica MDOA010621 N 0.000
NV13471 Nasonia vitripennis NV13471 N 0.000
PHUM221070 Pediculus humanus PHUM221070 N 0.000
PPAI000190 Phlebotomus papatasi PPAI000190 N 0.000
SINV11338 Solenopsis invicta SINV11338 N 0.000
TC003707 Tribolium castaneum TC003707 N 0.000
L798_13970 Zootermopsis nevadensis L798_13970 N 0.000