Lus10037719.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10037719.g T288190_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN

NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.894 0.979
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN

NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.891 0.979
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.780 0.915
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.720 0.851
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.716 0.851
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.716 0.851
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN

NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.689 0.851
ARR10
M02702_2.00
Arabidopsis thaliana
AGATHYKN

NMRDATCT
SELEX
Mathelier et al.(2014)
MA0121.1
0.669 0.745
ARR10
M11045_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ARR10_01
0.669 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10037719 Myb 216 266

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

Invalid Input OrderBy

343 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action