Lus10038395.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10038395.g T288197_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATY53
M07078_2.00
Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN

NNNNNNNNDDHGKTWGGTRVR
Dap-seq
OMalley et al.(2016)
MYB67_col_a
0.698 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038395 Myb 22 69
Lus10038395 Myb 75 120

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10001226.g Linum usitatissimum Lus10001226.g N 0.833
SapurV1A.0122s0490 Salix purpurea SapurV1A.0122s0490 I 0.716
POPTR_0003s15440 Populus trichocarpa POPTR_0003s15440 I 0.716
cassava11527.m1 Manihot esculenta cassava11527.m1 I 0.708
ATY53 Arabidopsis thaliana AT3G12720 D 0.698
ATY53 Arabidopsis lyrata scaffold_301452.1 I 0.698
Bostr.3640s0047 Boechera stricta Bostr.3640s0047 I 0.698
Cagra.5641s0037 Capsella grandiflora Cagra.5641s0037 I 0.698
Carubv10015099m.g Capsella rubella Carubv10015099m.g I 0.698
POPTR_0008s08110 Populus trichocarpa POPTR_0008s08110 I 0.698
cassava33147.m1 Manihot esculenta cassava33147.m1 I 0.694
POPTR_0001s12240 Populus trichocarpa POPTR_0001s12240 I 0.693
TCM_005977 Theobroma cacao TCM_005977 I 0.692
orange1.1g036087m.g Citrus sinensis orange1.1g036087m.g I 0.692
Ciclev10006752m.g Citrus clementina Ciclev10006752m.g I 0.692
27956.m000359 Ricinus communis 27956.m000359 I 0.686
SapurV1A.0236s0090 Salix purpurea SapurV1A.0236s0090 I 0.685
30125.m001257 Ricinus communis 30125.m001257 I 0.683
LjT35F06.10.nd Lotus japonicus LjT35F06.10.nd I 0.683
cassava26068.m1 Manihot esculenta cassava26068.m1 I 0.682
Eucgr.E04323 Eucalyptus grandis Eucgr.E04323 I 0.682
Ciclev10018009m.g Citrus clementina Ciclev10018009m.g I 0.681
orange1.1g039070m.g Citrus sinensis orange1.1g039070m.g I 0.681
Pm010847 Prunus mume Pm010847 I 0.675
PRUPE_ppa026618mg Prunus persica PRUPE_ppa026618mg I 0.675
Thhalv10022066m.g Eutrema salsugineum Thhalv10022066m.g I 0.674
Gorai.004G268300 Gossypium raimondii Gorai.004G268300 I 0.674
BRADI1G61397 Brachypodium distachyon BRADI1G61397 I 0.674
Pm010927 Prunus mume Pm010927 I 0.674
GLYMA08G17371 Glycine max GLYMA08G17371 I 0.674
TCM_033645 Theobroma cacao TCM_033645 I 0.674
30054.m000809 Ricinus communis 30054.m000809 I 0.672
MDP0000226667 Malus domestica MDP0000226667 I 0.669
SapurV1A.0149s0490 Salix purpurea SapurV1A.0149s0490 I 0.668
SapurV1A.4138s0010 Salix purpurea SapurV1A.4138s0010 I 0.668
Bra039339 Brassica rapa Bra039339 I 0.668
Bo1g138990 Brassica oleracea Bo1g138990 I 0.668
Bo5g133210 Brassica oleracea Bo5g133210 I 0.665
Bra034738 Brassica rapa Bra034738 I 0.665
MTR_2g064160 Medicago truncatula MTR_2g064160 I 0.665
gene19934-v1.0-hybrid Fragaria vesca gene19934-v1.0-hybrid I 0.664
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I 0.663
Cagra.10702s0006 Capsella grandiflora Cagra.10702s0006 I 0.661
Carubv10020714m.g Capsella rubella Carubv10020714m.g I 0.661