MDP0000136727 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000136727 T288298_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.729 0.894
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.717 0.894
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.711 0.872
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.693 0.872
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.690 0.851
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.680 0.809
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.669 0.872
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.669 0.872
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.669 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000136727 Myb 92 139

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr9G05930_001 Musa acuminata GSMUA_Achr9G05930_001 I 0.849
OBART05G18640 Oryza barthii OBART05G18640 I 0.807
F775_18928 Aegilops tauschii F775_18928 I 0.800
Traes_3DS_DF23FE973 Triticum aestivum Traes_3DS_DF23FE973 I 0.800
TRAES3BF110700030CFD_g Triticum aestivum TRAES3BF110700030CFD_g I 0.800
Pavir.J01328 Panicum virgatum Pavir.J01328 I 0.797
mgf026007m Mimulus guttatus mgf026007m I 0.787
GRMZM2G176568 Zea mays GRMZM2G176568 I 0.776
Sb09g030390 Sorghum bicolor Sb09g030390 I 0.775
Si022624m.g Setaria italica Si022624m.g I 0.775
Pavir.J38363 Panicum virgatum Pavir.J38363 I 0.775
Pavir.J35324 Panicum virgatum Pavir.J35324 I 0.775
MDP0000758053 Malus domestica MDP0000758053 I 0.760
MLOC_52982 Hordeum vulgare MLOC_52982 I 0.758
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I 0.751
BRADI3G14830 Brachypodium distachyon BRADI3G14830 I 0.748
orange1.1g038601m.g Citrus sinensis orange1.1g038601m.g I 0.743
Ciclev10009011m.g Citrus clementina Ciclev10009011m.g I 0.743
PRUPE_ppa008539mg Prunus persica PRUPE_ppa008539mg I 0.742
gene00738-v1.0-hybrid Fragaria vesca gene00738-v1.0-hybrid I 0.742
Pm006358 Prunus mume Pm006358 I 0.742
Lus10010733.g Linum usitatissimum Lus10010733.g I 0.742
Pavir.Eb00103 Panicum virgatum Pavir.Eb00103 I 0.733
Sb09g006060 Sorghum bicolor Sb09g006060 I 0.733
Cucsa.397260 Cucumis sativus Cucsa.397260 I 0.733
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I 0.729
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I 0.729
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I 0.729
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I 0.729
Lus10036652.g Linum usitatissimum Lus10036652.g I 0.729
MDP0000230601 Malus domestica MDP0000230601 I 0.729
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I 0.729
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I 0.729
30147.m014028 Ricinus communis 30147.m014028 I 0.729
Pm024648 Prunus mume Pm024648 I 0.729
Cla019445 Citrullus lanatus Cla019445 I 0.729
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I 0.729
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I 0.729
Cucsa.197320 Cucumis sativus Cucsa.197320 I 0.729
Cucsa.098110 Cucumis sativus Cucsa.098110 I 0.729
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I 0.729
Ca_17597 Cicer arietinum Ca_17597 I 0.729
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I 0.729
TCM_013524 Theobroma cacao TCM_013524 I 0.729
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I 0.729
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I 0.729
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I 0.729
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I 0.729
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I 0.729
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I 0.729
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I 0.729
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I 0.729
MLOC_20277 Hordeum vulgare MLOC_20277 I 0.729
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I 0.729
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I 0.729
PK17526.1 Cannabis sativa PK17526.1 D 0.729
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I 0.729
MTR_5g037080 Medicago truncatula MTR_5g037080 I 0.729
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.720
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I 0.719
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I 0.719
mgf003276m Mimulus guttatus mgf003276m I 0.719
Ca_17598 Cicer arietinum Ca_17598 I 0.718
PK23829.1 Cannabis sativa PK23829.1 D 0.717
OB01G46940 Oryza brachyantha OB01G46940 N 0.712
GLYMA01G04530 Glycine max GLYMA01G04530 I 0.711
Cucsa.361050 Cucumis sativus Cucsa.361050 I 0.711
GLYMA02G03020 Glycine max GLYMA02G03020 I 0.711
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I 0.711
GLYMA17G10250 Glycine max GLYMA17G10250 I 0.711
GLYMA05G01640 Glycine max GLYMA05G01640 I 0.711
GLYMA08G40460 Glycine max GLYMA08G40460 I 0.711
AT1G70000 Arabidopsis thaliana AT1G70000 I 0.711
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I 0.711
TCM_010118 Theobroma cacao TCM_010118 I 0.711
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I 0.711
Bo6g094990 Brassica oleracea Bo6g094990 I 0.711
Cla000916 Citrullus lanatus Cla000916 I 0.711
Bo2g066810 Brassica oleracea Bo2g066810 I 0.711
29736.m002089 Ricinus communis 29736.m002089 I 0.711
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I 0.711
Bra003969 Brassica rapa Bra003969 I 0.711
Bra007892 Brassica rapa Bra007892 I 0.711
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I 0.711
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I 0.711
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I 0.711
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I 0.711
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I 0.711
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I 0.711
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I 0.711
Lus10013289.g Linum usitatissimum Lus10013289.g I 0.711
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I 0.711
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I 0.711
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D 0.711
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I 0.711
OLONG_027538 Oryza longistaminata OLONG_027538 I 0.709
ORGLA03G0402100 Oryza glaberrima ORGLA03G0402100 I 0.709
Traes_2AL_C13CD3ECB Triticum aestivum Traes_2AL_C13CD3ECB I 0.709
MDP0000199437 Malus domestica MDP0000199437 I 0.708
MDP0000140324 Malus domestica MDP0000140324 I 0.708
MDP0000149809 Malus domestica MDP0000149809 I 0.708
Sb03g006450 Sorghum bicolor Sb03g006450 I 0.707
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I 0.707
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I 0.707
Lus10004248.g Linum usitatissimum Lus10004248.g I 0.707
Ciclev10030461m.g Citrus clementina Ciclev10030461m.g I 0.706
OB05G25980 Oryza brachyantha OB05G25980 I 0.705
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I 0.703
Sb03g003150 Sorghum bicolor Sb03g003150 I 0.703
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I 0.703
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I 0.701
Lus10036678.g Linum usitatissimum Lus10036678.g I 0.701
Carubv10020813m.g Capsella rubella Carubv10020813m.g I 0.701
mgf011892m Mimulus guttatus mgf011892m I 0.701
Aquca_025_00167 Aquilegia coerulea Aquca_025_00167 I 0.701
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I 0.701
GLYMA07G08081 Glycine max GLYMA07G08081 N 0.701
Solyc02g082380.1 Solanum lycopersicum Solyc02g082380.1 I 0.701
GLYMA04G34720 Glycine max GLYMA04G34720 I 0.698
MTR_4g107230 Medicago truncatula MTR_4g107230 I 0.698
GLYMA06G19960 Glycine max GLYMA06G19960 I 0.698
SapurV1A.1685s0020 Salix purpurea SapurV1A.1685s0020 I 0.697
MDP0000938309 Malus domestica MDP0000938309 I 0.695
gw1.6.1691.1 Ostreococcus RCC809 gw1.6.1691.1 I 0.693
0600010132 Ostreococcus tauri 0600010132 D 0.693
OSTLU_9418 Ostreococcus lucimarinus OSTLU_9418 I 0.693
Bra027170 Brassica rapa Bra027170 I 0.690
Cagra.6624s0006 Capsella grandiflora Cagra.6624s0006 I 0.690
VIT_09s0002g03540 Vitis vinifera VIT_09s0002g03540 I 0.690
Thhalv10020915m.g Eutrema salsugineum Thhalv10020915m.g I 0.690
Bostr.28625s0055 Boechera stricta Bostr.28625s0055 I 0.690
OBART08G02720 Oryza barthii OBART08G02720 I 0.690
Bo5g126180 Brassica oleracea Bo5g126180 I 0.690
Pavir.J25346 Panicum virgatum Pavir.J25346 I 0.690
Carubv10013924m.g Capsella rubella Carubv10013924m.g I 0.690
BGIOSGA027973 Oryza indica BGIOSGA027973 I 0.690
OGLUM08G02800 Oryza glumaepatula OGLUM08G02800 I 0.690
VIT_09s0002g03610 Vitis vinifera VIT_09s0002g03610 I 0.690
ONIVA08G02810 Oryza nivara ONIVA08G02810 I 0.690
LPERR08G02800 Leersia perrieri LPERR08G02800 I 0.690
ORUFI08G03000 Oryza rufipogon ORUFI08G03000 I 0.690
Si013948m.g Setaria italica Si013948m.g I 0.690
SELMODRAFT_137652 Selaginella moellendorffii SELMODRAFT_137652 I 0.690
OS08G0144000 Oryza sativa OS08G0144000 I 0.690
SELMODRAFT_133546 Selaginella moellendorffii SELMODRAFT_133546 I 0.690
fgenesh2_kg.3__1788__AT3G16350.1 Arabidopsis lyrata fgenesh2_kg.3__1788__AT3G16350.1 I 0.690
ORGLA08G0021900 Oryza glaberrima ORGLA08G0021900 I 0.690
AT3G16350 Arabidopsis thaliana AT3G16350 D 0.690
Sb07g003170 Sorghum bicolor Sb07g003170 I 0.690
OMERI08G02700 Oryza meridionalis OMERI08G02700 I 0.690
POPTR_0001s22660 Populus trichocarpa POPTR_0001s22660 I 0.690
OPUNC08G02520 Oryza punctata OPUNC08G02520 I 0.690
GLYMA15G02250 Glycine max GLYMA15G02250 I 0.689
Aquca_001_00262 Aquilegia coerulea Aquca_001_00262 I 0.689
TCM_028884 Theobroma cacao TCM_028884 I 0.689
MLOC_79329 Hordeum vulgare MLOC_79329 I 0.689
Gorai.009G137300 Gossypium raimondii Gorai.009G137300 I 0.689
TRIUR3_09932 Triticum urartu TRIUR3_09932 I 0.689
MTR_2g100930 Medicago truncatula MTR_2g100930 I 0.689
Ca_02786 Cicer arietinum Ca_02786 I 0.689
GLYMA13G43120 Glycine max GLYMA13G43120 I 0.689
Cucsa.285620 Cucumis sativus Cucsa.285620 I 0.689
Gorai.007G371900 Gossypium raimondii Gorai.007G371900 I 0.688
GSMUA_Achr1G01650_001 Musa acuminata GSMUA_Achr1G01650_001 I 0.688
Aquca_004_00370 Aquilegia coerulea Aquca_004_00370 I 0.687
OPUNC05G25370 Oryza punctata OPUNC05G25370 I 0.686
ONIVA05G29740 Oryza nivara ONIVA05G29740 I 0.686
OPUNC05G25400 Oryza punctata OPUNC05G25400 I 0.686
OGLUM05G29240 Oryza glumaepatula OGLUM05G29240 I 0.686
OB05G35300 Oryza brachyantha OB05G35300 I 0.686
OBART05G27750 Oryza barthii OBART05G27750 I 0.686
ORGLA05G0241200 Oryza glaberrima ORGLA05G0241200 I 0.686
OMERI05G23670 Oryza meridionalis OMERI05G23670 I 0.686
OS05G0589400 Oryza sativa OS05G0589400 I 0.686
ORUFI05G29720 Oryza rufipogon ORUFI05G29720 I 0.686
BGIOSGA017461 Oryza indica BGIOSGA017461 I 0.686
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I 0.685
Solyc08g065380.2 Solanum lycopersicum Solyc08g065380.2 I 0.685
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I 0.685
SapurV1A.0408s0140 Salix purpurea SapurV1A.0408s0140 I 0.682
POPTR_0001s19070 Populus trichocarpa POPTR_0001s19070 I 0.682
SapurV1A.0002s0030 Salix purpurea SapurV1A.0002s0030 I 0.682
EuGene.0300010169 Micromonas sp RCC299 EuGene.0300010169 I 0.681
Traes_3AS_965E2F790 Triticum aestivum Traes_3AS_965E2F790 I 0.681
TRIUR3_12855 Triticum urartu TRIUR3_12855 I 0.681
Traes_3DS_61692C8F3 Triticum aestivum Traes_3DS_61692C8F3 I 0.681
F775_11223 Aegilops tauschii F775_11223 I 0.681
TRAES3BF186800050CFD_g Triticum aestivum TRAES3BF186800050CFD_g I 0.681
estExt_fgenesh1_pg.C_60110 Micromonas pusilla estExt_fgenesh1_pg.C_60110 I 0.681
mgf012785m Mimulus guttatus mgf012785m I 0.680
Eucgr.J02939 Eucalyptus grandis Eucgr.J02939 I 0.680
cassava22335.valid.m1 Manihot esculenta cassava22335.valid.m1 I 0.680
Lus10038279.g Linum usitatissimum Lus10038279.g I 0.680
cassava31470.valid.m1 Manihot esculenta cassava31470.valid.m1 I 0.680
orange1.1g016477m.g Citrus sinensis orange1.1g016477m.g I 0.680
Lus10006826.g Linum usitatissimum Lus10006826.g I 0.680
SELMODRAFT_84280 Selaginella moellendorffii SELMODRAFT_84280 I 0.680
Lus10025822.g Linum usitatissimum Lus10025822.g I 0.680
30146.m003509 Ricinus communis 30146.m003509 I 0.680
Ciclev10025950m.g Citrus clementina Ciclev10025950m.g I 0.680
PK29550.1 Cannabis sativa PK29550.1 D 0.680
Lus10037560.g Linum usitatissimum Lus10037560.g I 0.680
Bra031060 Brassica rapa Bra031060 I 0.679
Traes_7DS_C6BEE3896 Triticum aestivum Traes_7DS_C6BEE3896 I 0.678
Solyc12g044610.1 Solanum lycopersicum Solyc12g044610.1 I 0.678
TRIUR3_30912 Triticum urartu TRIUR3_30912 I 0.678
PGSC0003DMG400026442 Solanum tuberosum PGSC0003DMG400026442 I 0.678
OPUNC01G22110 Oryza punctata OPUNC01G22110 I 0.676
ORUFI01G24630 Oryza rufipogon ORUFI01G24630 I 0.676
ORGLA01G0174500 Oryza glaberrima ORGLA01G0174500 I 0.676
OB01G31400 Oryza brachyantha OB01G31400 I 0.676
LPERR01G18690 Leersia perrieri LPERR01G18690 I 0.676
BGIOSGA003931 Oryza indica BGIOSGA003931 I 0.676
F775_32973 Aegilops tauschii F775_32973 I 0.676
MLOC_7981 Hordeum vulgare MLOC_7981 I 0.676
OBART01G21920 Oryza barthii OBART01G21920 I 0.676
OMERI01G20200 Oryza meridionalis OMERI01G20200 I 0.676
OLONG_007893 Oryza longistaminata OLONG_007893 I 0.676
OGLUM01G25620 Oryza glumaepatula OGLUM01G25620 I 0.676
ONIVA01G25110 Oryza nivara ONIVA01G25110 I 0.676
OS01G0603300 Oryza sativa OS01G0603300 I 0.676
Traes_3DL_F1DB969A8 Triticum aestivum Traes_3DL_F1DB969A8 I 0.676
TRAES3BF053400010CFD_g Triticum aestivum TRAES3BF053400010CFD_g I 0.676
Traes_3AL_55A3F252C Triticum aestivum Traes_3AL_55A3F252C I 0.676
AMTR_s00111p00135880 Amborella trichopoda AMTR_s00111p00135880 I 0.675
Ciclev10009128m.g Citrus clementina Ciclev10009128m.g I 0.675
orange1.1g047042m.g Citrus sinensis orange1.1g047042m.g I 0.675
LjB09A03.30.nc Lotus japonicus LjB09A03.30.nc I 0.674
SapurV1A.0138s0010 Salix purpurea SapurV1A.0138s0010 I 0.673
SapurV1A.1673s0010 Salix purpurea SapurV1A.1673s0010 I 0.673
GRMZM2G112764 Zea mays GRMZM2G112764 I 0.672
AT1G74840 Arabidopsis thaliana AT1G74840 D 0.669
cassava4591.m1 Manihot esculenta cassava4591.m1 I 0.669
LjSGA_030087.1 Lotus japonicus LjSGA_030087.1 I 0.668
BRADI2G42870 Brachypodium distachyon BRADI2G42870 I 0.665
Bo8g068220 Brassica oleracea Bo8g068220 I 0.665
Bra016530 Brassica rapa Bra016530 I 0.665
BGIOSGA015321 Oryza indica BGIOSGA015321 I 0.663
ONIVA04G06580 Oryza nivara ONIVA04G06580 I 0.663
Traes_1AL_01E24503F Triticum aestivum Traes_1AL_01E24503F I 0.663
OBART04G08050 Oryza barthii OBART04G08050 I 0.663
Traes_1BL_1B12D7856 Triticum aestivum Traes_1BL_1B12D7856 I 0.663
Ca_05889 Cicer arietinum Ca_05889 I 0.662
Cucsa.395160 Cucumis sativus Cucsa.395160 I 0.662
Lus10027781.g Linum usitatissimum Lus10027781.g I 0.662
PGSC0003DMG400000340 Solanum tuberosum PGSC0003DMG400000340 I 0.662
VIT_11s0016g02410 Vitis vinifera VIT_11s0016g02410 I 0.662
Solyc12g008800.1 Solanum lycopersicum Solyc12g008800.1 I 0.662
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.662
TCM_037276 Theobroma cacao TCM_037276 I 0.662
TCM_037687 Theobroma cacao TCM_037687 I 0.662
GSMUA_Achr5G09240_001 Musa acuminata GSMUA_Achr5G09240_001 I 0.662
Lus10030813.g Linum usitatissimum Lus10030813.g I 0.662
SapurV1A.1274s0030 Salix purpurea SapurV1A.1274s0030 I 0.662
Gorai.010G081800 Gossypium raimondii Gorai.010G081800 I 0.662
GLYMA05G36290 Glycine max GLYMA05G36290 I 0.662
GLYMA08G03330 Glycine max GLYMA08G03330 I 0.662
POPTR_0006s15480 Populus trichocarpa POPTR_0006s15480 I 0.662