MDP0000158937 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000158937 T288341_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATY53
M07078_2.00
Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN

NNNNNNNNDDHGKTWGGTRVR
Dap-seq
OMalley et al.(2016)
MYB67_col_a
0.687 0.902
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000158937 Myb 13 48
MDP0000158937 Myb 54 99

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ATY53 Arabidopsis thaliana AT3G12720 D 0.687
Pm010927 Prunus mume Pm010927 I 0.718
27956.m000359 Ricinus communis 27956.m000359 I 0.692
30125.m001257 Ricinus communis 30125.m001257 I 0.664
cassava11527.m1 Manihot esculenta cassava11527.m1 I 0.682
cassava33147.m1 Manihot esculenta cassava33147.m1 I 0.690
mgf026023m Mimulus guttatus mgf026023m I 0.664
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I 0.671
Bostr.3640s0047 Boechera stricta Bostr.3640s0047 I 0.687
Cagra.5641s0037 Capsella grandiflora Cagra.5641s0037 I 0.687
Carubv10015099m.g Capsella rubella Carubv10015099m.g I 0.687
Eucgr.E04323 Eucalyptus grandis Eucgr.E04323 I 0.689
Gorai.004G268300 Gossypium raimondii Gorai.004G268300 I 0.692
MDP0000157506 Malus domestica MDP0000157506 I 0.753
MDP0000226667 Malus domestica MDP0000226667 I 0.721
SapurV1A.0149s0490 Salix purpurea SapurV1A.0149s0490 I 0.680
SapurV1A.4138s0010 Salix purpurea SapurV1A.4138s0010 I 0.680
Pm010847 Prunus mume Pm010847 I 0.700
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.694
Bo1g138990 Brassica oleracea Bo1g138990 I 0.712
Bo5g133210 Brassica oleracea Bo5g133210 I 0.703
Bra027389 Brassica rapa Bra027389 I 0.676
Bra034738 Brassica rapa Bra034738 I 0.703
Bra039339 Brassica rapa Bra039339 I 0.712
GLYMA15G02955 Glycine max GLYMA15G02955 I 0.663
GSMUA_Achr9G25110_001 Musa acuminata GSMUA_Achr9G25110_001 I 0.690
Thhalv10022066m.g Eutrema salsugineum Thhalv10022066m.g I 0.712
PGSC0003DMG400007325 Solanum tuberosum PGSC0003DMG400007325 I 0.677
PRUPE_ppa022859mg Prunus persica PRUPE_ppa022859mg I 0.731
PRUPE_ppa026618mg Prunus persica PRUPE_ppa026618mg I 0.700
ATY53 Arabidopsis lyrata scaffold_301452.1 I 0.672
Solyc02g082040.2 Solanum lycopersicum Solyc02g082040.2 I 0.677
Solyc10g005240.2 Solanum lycopersicum Solyc10g005240.2 I 0.695
TCM_005977 Theobroma cacao TCM_005977 I 0.688
TCM_033645 Theobroma cacao TCM_033645 I 0.662
LPERR05G20350 Leersia perrieri LPERR05G20350 N 0.675