MDP0000192297 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000192297 T288391_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.683 0.702
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.677 0.681
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.677 0.681
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.677 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000192297 Myb 65 116

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

206 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000269857 Malus domestica MDP0000269857 I 0.727
gene24269-v1.0-hybrid Fragaria vesca gene24269-v1.0-hybrid I 0.710
OBART08G11780 Oryza barthii OBART08G11780 I 0.705
GRMZM2G064197 Zea mays GRMZM2G064197 I 0.705
OS09G0299000 Oryza sativa OS09G0299000 I 0.705
LPERR09G03200 Leersia perrieri LPERR09G03200 I 0.705
MLOC_56761 Hordeum vulgare MLOC_56761 I 0.705
Si030441m.g Setaria italica Si030441m.g I 0.705
LPERR08G09740 Leersia perrieri LPERR08G09740 I 0.705
OS08G0346400 Oryza sativa OS08G0346400 I 0.705
GSMUA_Achr1G16440_001 Musa acuminata GSMUA_Achr1G16440_001 I 0.705
GSMUA_Achr1G19430_001 Musa acuminata GSMUA_Achr1G19430_001 I 0.705
GSMUA_Achr3G11980_001 Musa acuminata GSMUA_Achr3G11980_001 I 0.705
ORUFI09G05100 Oryza rufipogon ORUFI09G05100 I 0.705
OPUNC09G03960 Oryza punctata OPUNC09G03960 I 0.705
GSMUA_Achr9G19070_001 Musa acuminata GSMUA_Achr9G19070_001 I 0.705
GRMZM2G113742 Zea mays GRMZM2G113742 I 0.705
ORUFI08G13020 Oryza rufipogon ORUFI08G13020 I 0.705
ONIVA09G04720 Oryza nivara ONIVA09G04720 I 0.705
OGLUM09G05270 Oryza glumaepatula OGLUM09G05270 I 0.705
BRADI4G27607 Brachypodium distachyon BRADI4G27607 I 0.705
OGLUM08G12590 Oryza glumaepatula OGLUM08G12590 I 0.705
Pavir.Bb01629 Panicum virgatum Pavir.Bb01629 I 0.705
OBART09G04520 Oryza barthii OBART09G04520 I 0.705
Pavir.Fb00789 Panicum virgatum Pavir.Fb00789 I 0.705
Traes_5DL_156E53683 Triticum aestivum Traes_5DL_156E53683 I 0.705
OMERI09G03700 Oryza meridionalis OMERI09G03700 I 0.705
Traes_5BL_A28533902 Triticum aestivum Traes_5BL_A28533902 I 0.705
ONIVA09G02600 Oryza nivara ONIVA09G02600 I 0.705
Eucgr.G02494 Eucalyptus grandis Eucgr.G02494 I 0.701
PGSC0003DMG400027229 Solanum tuberosum PGSC0003DMG400027229 I 0.699
Solyc04g015290.2 Solanum lycopersicum Solyc04g015290.2 I 0.699
LPERR03G13840 Leersia perrieri LPERR03G13840 I 0.698
OGLUM03G15970 Oryza glumaepatula OGLUM03G15970 I 0.698
OBART03G15810 Oryza barthii OBART03G15810 I 0.698
ONIVA03G16790 Oryza nivara ONIVA03G16790 I 0.698
OPUNC03G15310 Oryza punctata OPUNC03G15310 I 0.698
OB03G25560 Oryza brachyantha OB03G25560 I 0.698
MLOC_52114 Hordeum vulgare MLOC_52114 I 0.698
GRMZM2G009060 Zea mays GRMZM2G009060 I 0.698
Gorai.013G086300 Gossypium raimondii Gorai.013G086300 I 0.698
TRIUR3_19658 Triticum urartu TRIUR3_19658 I 0.698
BRADI1G63690 Brachypodium distachyon BRADI1G63690 I 0.698
BGIOSGA012541 Oryza indica BGIOSGA012541 I 0.698
Pavir.Ba00251 Panicum virgatum Pavir.Ba00251 I 0.698
Pavir.J24966 Panicum virgatum Pavir.J24966 I 0.698
Pavir.Ib01520 Panicum virgatum Pavir.Ib01520 I 0.698
Traes_4BL_32D8155C6 Triticum aestivum Traes_4BL_32D8155C6 I 0.698
Si036390m.g Setaria italica Si036390m.g I 0.698
Sb01g036680 Sorghum bicolor Sb01g036680 I 0.698
OS03G0325500 Oryza sativa OS03G0325500 I 0.698
ORUFI03G16400 Oryza rufipogon ORUFI03G16400 I 0.698
ORGLA03G0151400 Oryza glaberrima ORGLA03G0151400 I 0.698
Sb02g043320 Sorghum bicolor Sb02g043320 I 0.698
F775_13717 Aegilops tauschii F775_13717 I 0.698
Si030350m.g Setaria italica Si030350m.g I 0.698
AC155434.2_FG005 Zea mays AC155434.2_FG005 I 0.698
PDK_20s1491101g001 Phoenix dactylifera PDK_20s1491101g001 I 0.692
Sb10g026550 Sorghum bicolor Sb10g026550 I 0.691
GRMZM2G081671 Zea mays GRMZM2G081671 I 0.691
VIT_00s0475g00030 Vitis vinifera VIT_00s0475g00030 I 0.689
Traes_1AL_2CFFBD60E Triticum aestivum Traes_1AL_2CFFBD60E I 0.683
gw1.12.332.1 Physcomitrella patens gw1.12.332.1 I 0.683
29813.m001501 Ricinus communis 29813.m001501 I 0.683
Eucgr.K01476 Eucalyptus grandis Eucgr.K01476 I 0.683
Traes_1BL_C0F4A948C Triticum aestivum Traes_1BL_C0F4A948C I 0.683
Traes_1DL_7589A1385 Triticum aestivum Traes_1DL_7589A1385 I 0.683
OS05G0488600 Oryza sativa OS05G0488600 I 0.683
Gorai.012G187000 Gossypium raimondii Gorai.012G187000 I 0.683
Bo9g157350 Brassica oleracea Bo9g157350 I 0.683
BRADI2G21880 Brachypodium distachyon BRADI2G21880 I 0.683
mgf014157m Mimulus guttatus mgf014157m I 0.683
Cagra.0906s0019 Capsella grandiflora Cagra.0906s0019 I 0.683
MYR1 Arabidopsis lyrata fgenesh2_kg.6__1830__AT5G18240.4 I 0.683
BRADI3G22297 Brachypodium distachyon BRADI3G22297 I 0.683
Bostr.26527s0384 Boechera stricta Bostr.26527s0384 I 0.683
Si022265m.g Setaria italica Si022265m.g I 0.683
SELMODRAFT_155847 Selaginella moellendorffii SELMODRAFT_155847 I 0.683
Sb09g023830 Sorghum bicolor Sb09g023830 I 0.683
Carubv10001129m.g Capsella rubella Carubv10001129m.g I 0.683
SELMODRAFT_149357 Selaginella moellendorffii SELMODRAFT_149357 I 0.683
BGIOSGA017828 Oryza indica BGIOSGA017828 I 0.683
GRMZM2G701218 Zea mays GRMZM2G701218 I 0.683
OMERI05G18910 Oryza meridionalis OMERI05G18910 I 0.683
Bra002145 Brassica rapa Bra002145 I 0.683
ONIVA05G21630 Oryza nivara ONIVA05G21630 I 0.683
ORUFI05G22210 Oryza rufipogon ORUFI05G22210 I 0.683
Thhalv10013729m.g Eutrema salsugineum Thhalv10013729m.g I 0.683
OLONG_003406 Oryza longistaminata OLONG_003406 I 0.683
OBART05G20920 Oryza barthii OBART05G20920 I 0.683
OGLUM05G22140 Oryza glumaepatula OGLUM05G22140 I 0.683
AC234155.1_FG002 Zea mays AC234155.1_FG002 I 0.683
OB05G28330 Oryza brachyantha OB05G28330 I 0.683
Pavir.J02359 Panicum virgatum Pavir.J02359 I 0.683
Pavir.J03485 Panicum virgatum Pavir.J03485 I 0.683
LPERR05G16760 Leersia perrieri LPERR05G16760 I 0.683
MLOC_63597 Hordeum vulgare MLOC_63597 I 0.683
MYR1 Arabidopsis thaliana AT5G18240 D 0.683
fgenesh1_pg.scaffold_27000005 Physcomitrella patens fgenesh1_pg.scaffold_27000005 I 0.683
GSMUA_Achr6G32220_001 Musa acuminata GSMUA_Achr6G32220_001 I 0.683
OPUNC05G18630 Oryza punctata OPUNC05G18630 I 0.683
Cucsa.340600 Cucumis sativus Cucsa.340600 I 0.683
AMTR_s00119p00095480 Amborella trichopoda AMTR_s00119p00095480 I 0.683
PGSC0003DMG400004567 Solanum tuberosum PGSC0003DMG400004567 I 0.682
Solyc12g098370.1 Solanum lycopersicum Solyc12g098370.1 I 0.682
Gorai.005G141900 Gossypium raimondii Gorai.005G141900 I 0.681
BRADI5G20520 Brachypodium distachyon BRADI5G20520 I 0.679
Bostr.2570s0305 Boechera stricta Bostr.2570s0305 I 0.677
mgf010580m Mimulus guttatus mgf010580m I 0.677
Aquca_072_00114 Aquilegia coerulea Aquca_072_00114 I 0.677
cassava22618.valid.m1 Manihot esculenta cassava22618.valid.m1 I 0.677
cassava35679.valid.m1 Manihot esculenta cassava35679.valid.m1 I 0.677
Gorai.004G244800 Gossypium raimondii Gorai.004G244800 I 0.677
MYR2 Arabidopsis thaliana AT3G04030 D 0.677
orange1.1g013552m.g Citrus sinensis orange1.1g013552m.g I 0.677
Al_scaffold_0003_352 Arabidopsis lyrata Al_scaffold_0003_352 I 0.677
SapurV1A.0308s0230 Salix purpurea SapurV1A.0308s0230 I 0.677
Thhalv10020861m.g Eutrema salsugineum Thhalv10020861m.g I 0.677
SapurV1A.0680s0090 Salix purpurea SapurV1A.0680s0090 I 0.677
MDP0000187636 Malus domestica MDP0000187636 I 0.677
Gorai.013G122900 Gossypium raimondii Gorai.013G122900 I 0.677
Ciclev10020171m.g Citrus clementina Ciclev10020171m.g I 0.677
Carubv10013932m.g Capsella rubella Carubv10013932m.g I 0.677
evm.TU.supercontig_785.2 Carica papaya evm.TU.supercontig_785.2 I 0.677
gene21073-v1.0-hybrid Fragaria vesca gene21073-v1.0-hybrid I 0.677
Gorai.007G287500 Gossypium raimondii Gorai.007G287500 I 0.677
Bo1g153240 Brassica oleracea Bo1g153240 I 0.677
Cagra.2026s0004 Capsella grandiflora Cagra.2026s0004 I 0.677
Pm025303 Prunus mume Pm025303 I 0.677
GLYMA12G31020 Glycine max GLYMA12G31020 I 0.677
PRUPE_ppa015076mg Prunus persica PRUPE_ppa015076mg I 0.677
POPTR_0019s04820 Populus trichocarpa POPTR_0019s04820 I 0.677
GLYMA11G18990 Glycine max GLYMA11G18990 I 0.677
GLYMA02G07790 Glycine max GLYMA02G07790 I 0.677
Solyc10g085620.1 Solanum lycopersicum Solyc10g085620.1 I 0.677
Solyc10g083340.1 Solanum lycopersicum Solyc10g083340.1 I 0.677
POPTR_0013s05670 Populus trichocarpa POPTR_0013s05670 I 0.677
GLYMA13G39290 Glycine max GLYMA13G39290 I 0.677
MTR_2g086450 Medicago truncatula MTR_2g086450 I 0.677
MTR_6g032990 Medicago truncatula MTR_6g032990 I 0.677
GSMUA_Achr9G05030_001 Musa acuminata GSMUA_Achr9G05030_001 I 0.677
GSMUA_Achr5G07670_001 Musa acuminata GSMUA_Achr5G07670_001 I 0.677
PGSC0003DMG400008401 Solanum tuberosum PGSC0003DMG400008401 I 0.677
GLYMA16G26820 Glycine max GLYMA16G26820 I 0.677
TCM_026448 Theobroma cacao TCM_026448 I 0.677
PGSC0003DMG400028164 Solanum tuberosum PGSC0003DMG400028164 I 0.677
Ca_07058 Cicer arietinum Ca_07058 I 0.677
Bra036412 Brassica rapa Bra036412 I 0.677
Bra031952 Brassica rapa Bra031952 I 0.677
VIT_08s0007g07580 Vitis vinifera VIT_08s0007g07580 I 0.677
Lus10020264.g Linum usitatissimum Lus10020264.g I 0.676
Lus10002629.g Linum usitatissimum Lus10002629.g I 0.676
SELMODRAFT_35907 Selaginella moellendorffii SELMODRAFT_35907 I 0.676
gw1.47.44.1 Physcomitrella patens gw1.47.44.1 I 0.676
Ca_16371 Cicer arietinum Ca_16371 I 0.673
estExt_fgenesh1_pg.C_2260017 Physcomitrella patens estExt_fgenesh1_pg.C_2260017 I 0.672
estExt_fgenesh1_pg.C_2690029 Physcomitrella patens estExt_fgenesh1_pg.C_2690029 I 0.672
gw1.37.249.1 Physcomitrella patens gw1.37.249.1 I 0.671
Eucgr.A02082 Eucalyptus grandis Eucgr.A02082 I 0.667
GLYMA12G09490 Glycine max GLYMA12G09490 I 0.667
GRMZM2G125704 Zea mays GRMZM2G125704 I 0.666
MTR_2g027800 Medicago truncatula MTR_2g027800 I 0.665
Gorai.010G247200 Gossypium raimondii Gorai.010G247200 I 0.665
orange1.1g022072m.g Citrus sinensis orange1.1g022072m.g I 0.665
Lus10038735.g Linum usitatissimum Lus10038735.g I 0.665
Lus10039123.g Linum usitatissimum Lus10039123.g I 0.665
TCM_030479 Theobroma cacao TCM_030479 I 0.665
SapurV1A.0089s0160 Salix purpurea SapurV1A.0089s0160 I 0.665
chr6.LjT02P05.130.nd Lotus japonicus chr6.LjT02P05.130.nd I 0.665
POPTR_0016s00320 Populus trichocarpa POPTR_0016s00320 I 0.665
Ciclev10016073m.g Citrus clementina Ciclev10016073m.g I 0.665
OB07G32210 Oryza brachyantha OB07G32210 I 0.664
OBART07G26710 Oryza barthii OBART07G26710 I 0.664
PK01305.1 Cannabis sativa PK01305.1 I 0.664
orange1.1g021481m.g Citrus sinensis orange1.1g021481m.g I 0.664
OGLUM07G26720 Oryza glumaepatula OGLUM07G26720 I 0.664
OLONG_007529 Oryza longistaminata OLONG_007529 I 0.664
OPUNC07G25120 Oryza punctata OPUNC07G25120 I 0.664
ORGLA07G0211200 Oryza glaberrima ORGLA07G0211200 I 0.664
ONIVA07G26450 Oryza nivara ONIVA07G26450 I 0.664
Pm009478 Prunus mume Pm009478 I 0.664
AMTR_s00089p00057120 Amborella trichopoda AMTR_s00089p00057120 I 0.664
LPERR07G23540 Leersia perrieri LPERR07G23540 I 0.664
SapurV1A.0058s0610 Salix purpurea SapurV1A.0058s0610 I 0.664
Cla021740 Citrullus lanatus Cla021740 I 0.664
OMERI07G23330 Oryza meridionalis OMERI07G23330 I 0.664
OS07G0685300 Oryza sativa OS07G0685300 I 0.664
cassava27734.m1 Manihot esculenta cassava27734.m1 I 0.664
cassava24345.valid.m1 Manihot esculenta cassava24345.valid.m1 I 0.664
gene09780-v1.0-hybrid Fragaria vesca gene09780-v1.0-hybrid I 0.664
VIT_05s0029g00060 Vitis vinifera VIT_05s0029g00060 I 0.664
Cucsa.256450 Cucumis sativus Cucsa.256450 I 0.664
TCM_020332 Theobroma cacao TCM_020332 I 0.664
Aquca_034_00135 Aquilegia coerulea Aquca_034_00135 I 0.664
Solyc09g091880.2 Solanum lycopersicum Solyc09g091880.2 I 0.664
cassava24344.valid.m1 Manihot esculenta cassava24344.valid.m1 I 0.664
Gorai.005G033900 Gossypium raimondii Gorai.005G033900 I 0.664
Lus10007132.g Linum usitatissimum Lus10007132.g I 0.664
Lus10016676.g Linum usitatissimum Lus10016676.g I 0.664
ORUFI07G27670 Oryza rufipogon ORUFI07G27670 I 0.664
BGIOSGA023696 Oryza indica BGIOSGA023696 I 0.664
Gorai.011G158500 Gossypium raimondii Gorai.011G158500 I 0.664
cassava13078.valid.m1 Manihot esculenta cassava13078.valid.m1 I 0.664
Gorai.006G222400 Gossypium raimondii Gorai.006G222400 I 0.664
29904.m002952 Ricinus communis 29904.m002952 I 0.664
MDP0000809773 Malus domestica MDP0000809773 I 0.664