MDP0000224740 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000224740 T288444_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.870 0.936
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.809 0.872
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.805 0.872
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.805 0.872
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN

NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.804 0.936
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN

NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.802 0.936
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN

NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.689 0.851
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN

NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.675 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000224740 Myb 215 265

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

496 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000390701 Angiostrongylus cantonensis ACAC_0000390701 I 0.000
ASIM_0000067201 Anisakis simplex ASIM_0000067201 N 0.000
ASU_01158 Ascaris suum ASU_01158 N 0.000
Bm2735 Brugia malayi Bm2735 N 0.000
CBG02112 Caenorhabditis briggsae CBG02112 N 0.000
CBN13062 Caenorhabditis brenneri CBN13062 N 0.000
CJA03864 Caenorhabditis japonica CJA03864 N 0.000
CRE07382 Caenorhabditis remanei CRE07382 N 0.000
DME_0000232301 Dracunculus medinensis DME_0000232301 N 0.000
EEL_0000426601 Elaeophora elaphi EEL_0000426601 N 0.000
HPBE_0000907401 Heligmosomoides bakeri HPBE_0000907401 I 0.000
HPLM_0001523301 Haemonchus placei HPLM_0001523301 N 0.000
L892_g21855 Steinernema scapterisci L892_g21855 N 0.000
L893_g21201 Steinernema glaseri L893_g21201 N 0.000
LOAG_02658 Loa loa LOAG_02658 N 0.000
nAv.1.0.1.g06563 Acanthocheilonema viteae nAv.1.0.1.g06563 N 0.000
nDi.2.2.2.g01604 Dirofilaria immitis nDi.2.2.2.g01604 N 0.000
OFLC_0001357601 Onchocerca flexuosa OFLC_0001357601 N 0.000
Ppa-hlh-15 Pristionchus pacificus PPA18782 N 0.000
PTRK_0001259000 Parastrongyloides trichosuri PTRK_0001259000 N 0.000
RSKR_0000319400 Rhabditophanes kr3021 RSKR_0000319400 N 0.000
scaffold4-EXSNAP2012.68 Pristionchus exspectatus scaffold4-EXSNAP2012.68 N 0.000
SPAL_0000999700 Strongyloides papillosus SPAL_0000999700 N 0.000
SSTP_0000772800 Strongyloides stercoralis SSTP_0000772800 N 0.000
SVE_1855700 Strongyloides venezuelensis SVE_1855700 N 0.000
TCNE_0000157901 Toxocara canis TCNE_0000157901 N 0.000
WUBG_01613 Wuchereria bancrofti WUBG_01613 N 0.000