MDP0000292581 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000292581 T288561_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN

NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.734 0.860
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN

NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.734 0.860
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN

NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.689 0.839
AT5G58900
M07146_2.00
Arabidopsis thaliana
HHWWYCTTATCYWHW

WDWRGATAAGRWWDD
Dap-seq
OMalley et al.(2016)
At5g58900_col_a
0.686 0.849
AT5G58900
M07147_2.00
Arabidopsis thaliana
HWYMTTATCHWNWWH

DWWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a
0.686 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000292581 Myb 135 182

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA017023 Oryza indica BGIOSGA017023 N 0.000
BRADI1G03620 Brachypodium distachyon BRADI1G03620 N 0.000
F775_04155 Aegilops tauschii F775_04155 N 0.000
GRMZM2G368909 Zea mays GRMZM2G368909 N 0.000
LPERR04G19190 Leersia perrieri LPERR04G19190 N 0.000
MLOC_2933 Hordeum vulgare MLOC_2933 N 0.000
OB04G30360 Oryza brachyantha OB04G30360 N 0.000
OBART04G23460 Oryza barthii OBART04G23460 N 0.000
OLONG_013234 Oryza longistaminata OLONG_013234 N 0.000
ONIVA04G22790 Oryza nivara ONIVA04G22790 N 0.000
OPUNC04G20980 Oryza punctata OPUNC04G20980 N 0.000
ORGLA04G0200000 Oryza glaberrima ORGLA04G0200000 N 0.000
ORUFI04G25140 Oryza rufipogon ORUFI04G25140 N 0.000
OS04G0590400 Oryza sativa OS04G0590400 N 0.000
Pavir.Ia00281 Panicum virgatum Pavir.Ia00281 N 0.000
Pavir.J16240 Panicum virgatum Pavir.J16240 N 0.000
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.000
Sb01g003110 Sorghum bicolor Sb01g003110 N 0.000
Si034627m.g Setaria italica Si034627m.g N 0.000
Traes_5AL_9AE0ED26A Triticum aestivum Traes_5AL_9AE0ED26A N 0.000
Traes_5BL_DF8EC4A24 Triticum aestivum Traes_5BL_DF8EC4A24 N 0.000