MDP0000305363 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000305363 T288577_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.686 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000305363 Myb 17 64
MDP0000305363 Myb 70 115

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_018971 Theobroma cacao TCM_018971 I 0.745
Pm015392 Prunus mume Pm015392 I 0.736
MDP0000286143 Malus domestica MDP0000286143 I 0.736
MDP0000250031 Malus domestica MDP0000250031 N 0.735
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.733
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.733
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.732
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.727
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.723
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.718
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I 0.715
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.715
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.708
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.708
Cla016762 Citrullus lanatus Cla016762 I 0.701
Cucsa.238540 Cucumis sativus Cucsa.238540 I 0.701
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I 0.699
Bo9g009020 Brassica oleracea Bo9g009020 I 0.695
ATMYB121 Vitis vinifera VIT_14s0083g01060 I 0.692
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I 0.692
Bra025410 Brassica rapa Bra025410 I 0.689
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I 0.686
ATMYB121 Arabidopsis thaliana AT3G30210 D 0.686
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I 0.686
Bo7g088650 Brassica oleracea Bo7g088650 I 0.686
Carubv10018530m.g Capsella rubella Carubv10018530m.g I 0.686
Lus10034372.g Linum usitatissimum Lus10034372.g I 0.683
mgf004640m Mimulus guttatus mgf004640m I 0.678
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.678
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.678
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.678
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.677
Lus10005079.g Linum usitatissimum Lus10005079.g I 0.674
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.674
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.674
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.673
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.672
Bra036202 Brassica rapa Bra036202 I 0.672
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.672
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.669
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.669
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.669
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.669
Pm009050 Prunus mume Pm009050 I 0.669
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.669
Bra028369 Brassica rapa Bra028369 I 0.669
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.669
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.669
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.669
MYB305 Arabidopsis thaliana AT3G24310 I 0.669
Bra001941 Brassica rapa Bra001941 I 0.669
Bo1g098860 Brassica oleracea Bo1g098860 I 0.669
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.669
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.669
Bo3g083130 Brassica oleracea Bo3g083130 I 0.669
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.669
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.668
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.668
Aquca_003_00309 Aquilegia coerulea Aquca_003_00309 I 0.666
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I 0.666
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.665
Bo7g033260 Brassica oleracea Bo7g033260 I 0.665
Bra015029 Brassica rapa Bra015029 I 0.665
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.664
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.664
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.664