MDP0000402013 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000402013 T288609_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.703 0.766
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.679 0.755
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.679 0.755
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.675 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000402013 Myb 13 60
MDP0000402013 Myb 66 136

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB4 Arabidopsis thaliana AT4G38620 D 0.679
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.675
MYB3 Arabidopsis thaliana AT1G22640 D 0.703
Cagra.1383s0046 Capsella grandiflora Cagra.1383s0046 I 0.665
Cagra.2350s0045 Capsella grandiflora Cagra.2350s0045 I 0.671
Carubv10005426m.g Capsella rubella Carubv10005426m.g I 0.665
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.735
Carubv10005438m.g Capsella rubella Carubv10005438m.g I 0.671
Carubv10009761m.g Capsella rubella Carubv10009761m.g I 0.703
Cagra.0114s0040 Capsella grandiflora Cagra.0114s0040 I 0.703
Bostr.7867s1358 Boechera stricta Bostr.7867s1358 I 0.671
Bostr.25542s0045 Boechera stricta Bostr.25542s0045 I 0.682
Bostr.12659s0116 Boechera stricta Bostr.12659s0116 I 0.700
Aquca_041_00154 Aquilegia coerulea Aquca_041_00154 I 0.694
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.668
Aquca_006_00250 Aquilegia coerulea Aquca_006_00250 I 0.661
mgf012705m Mimulus guttatus mgf012705m I 0.673
Cucsa.370600 Cucumis sativus Cucsa.370600 I 0.682
Ciclev10002068m.g Citrus clementina Ciclev10002068m.g I 0.674
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.675
gene07646-v1.0-hybrid Fragaria vesca gene07646-v1.0-hybrid I 0.682
evm.TU.supercontig_51.139 Carica papaya evm.TU.supercontig_51.139 I 0.665
evm.TU.supercontig_37.149 Carica papaya evm.TU.supercontig_37.149 I 0.682
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.675
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.664
Eucgr.I01406 Eucalyptus grandis Eucgr.I01406 I 0.682
Eucgr.I00012 Eucalyptus grandis Eucgr.I00012 I 0.661
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.771
Eucgr.G01774 Eucalyptus grandis Eucgr.G01774 I 0.682
Eucgr.F02583 Eucalyptus grandis Eucgr.F02583 I 0.682
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.775
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.743
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I 0.747
Ciclev10028908m.g Citrus clementina Ciclev10028908m.g I 0.665
Ciclev10017654m.g Citrus clementina Ciclev10017654m.g I 0.748
Cucsa.234310 Cucumis sativus Cucsa.234310 I 0.682
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.691
Pm020852 Prunus mume Pm020852 I 0.682
Pm014372 Prunus mume Pm014372 I 0.738
Pm005573 Prunus mume Pm005573 I 0.686
Pm004199 Prunus mume Pm004199 I 0.691
Cla020592 Citrullus lanatus Cla020592 I 0.682
Cla016084 Citrullus lanatus Cla016084 I 0.682
Cla012721 Citrullus lanatus Cla012721 I 0.691
Ca_16131 Cicer arietinum Ca_16131 I 0.705
Ca_11026 Cicer arietinum Ca_11026 I 0.682
VIT_17s0000g02660 Vitis vinifera VIT_17s0000g02660 I 0.751
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.757
VIT_14s0006g01620 Vitis vinifera VIT_14s0006g01620 I 0.714
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.662
VIT_06s0004g00570 Vitis vinifera VIT_06s0004g00570 I 0.668
Pm025102 Prunus mume Pm025102 I 0.735
Pm025103 Prunus mume Pm025103 I 0.813
Pm027048 Prunus mume Pm027048 I 0.666
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.675
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.675
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.728
cassava4975.m1 Manihot esculenta cassava4975.m1 I 0.678
cassava35464.valid.m1 Manihot esculenta cassava35464.valid.m1 I 0.674
cassava30431.valid.m1 Manihot esculenta cassava30431.valid.m1 I 0.682
cassava29150.valid.m1 Manihot esculenta cassava29150.valid.m1 I 0.682
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.762
cassava2597.m1 Manihot esculenta cassava2597.m1 I 0.663
cassava1644.valid.m1 Manihot esculenta cassava1644.valid.m1 I 0.678
cassava16245.m1 Manihot esculenta cassava16245.m1 I 0.674
29602.m000218 Ricinus communis 29602.m000218 I 0.682
28154.m000040 Ricinus communis 28154.m000040 I 0.691
Pm029185 Prunus mume Pm029185 I 0.751
VIT_03s0038g02310 Vitis vinifera VIT_03s0038g02310 I 0.682
LjSGA_007368.1 Lotus japonicus LjSGA_007368.1 I 0.675
SapurV1A.0591s0010 Salix purpurea SapurV1A.0591s0010 I 0.661
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.667
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.667
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.707
SapurV1A.0163s0150 Salix purpurea SapurV1A.0163s0150 I 0.757
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.730
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.696
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.675
Pavir.J16675 Panicum virgatum Pavir.J16675 I 0.664
Pavir.J11802 Panicum virgatum Pavir.J11802 I 0.664
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.693
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.673
Pavir.Hb01732 Panicum virgatum Pavir.Hb01732 I 0.667
Pavir.Ha00871 Panicum virgatum Pavir.Ha00871 I 0.670
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.677
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.675
SapurV1A.0923s0040 Salix purpurea SapurV1A.0923s0040 I 0.679
chr2.CM0405.380.nd Lotus japonicus chr2.CM0405.380.nd I 0.706
PK29029.1 Cannabis sativa PK29029.1 I 0.682
PK21058.1 Cannabis sativa PK21058.1 I 0.687
PK11717.1 Cannabis sativa PK11717.1 I 0.707
PK05970.1 Cannabis sativa PK05970.1 I 0.745
Thhalv10025926m.g Eutrema salsugineum Thhalv10025926m.g I 0.671
Thhalv10025886m.g Eutrema salsugineum Thhalv10025886m.g I 0.682
Thhalv10008456m.g Eutrema salsugineum Thhalv10008456m.g I 0.703
SapurV1A.2094s0030 Salix purpurea SapurV1A.2094s0030 I 0.678
SapurV1A.1807s0010 Salix purpurea SapurV1A.1807s0010 I 0.753
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.707
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.675
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.675
SapurV1A.1127s0040 Salix purpurea SapurV1A.1127s0040 I 0.661
Pavir.Ca00232 Panicum virgatum Pavir.Ca00232 I 0.663
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.663
Pavir.Bb02469 Panicum virgatum Pavir.Bb02469 I 0.679
Lus10001548.g Linum usitatissimum Lus10001548.g I 0.679
Lus10000411.g Linum usitatissimum Lus10000411.g I 0.665
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.691
Gorai.009G288900 Gossypium raimondii Gorai.009G288900 I 0.687
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I 0.680
Gorai.008G035700 Gossypium raimondii Gorai.008G035700 I 0.682
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.675
Gorai.007G179300 Gossypium raimondii Gorai.007G179300 I 0.738
Gorai.006G192400 Gossypium raimondii Gorai.006G192400 I 0.719
Gorai.005G254000 Gossypium raimondii Gorai.005G254000 I 0.678
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.732
Gorai.002G196700 Gossypium raimondii Gorai.002G196700 I 0.682
Gorai.002G180300 Gossypium raimondii Gorai.002G180300 I 0.734
gene25685-v1.0-hybrid Fragaria vesca gene25685-v1.0-hybrid I 0.682
Lus10009448.g Linum usitatissimum Lus10009448.g I 0.688
Lus10014129.g Linum usitatissimum Lus10014129.g I 0.662
Lus10016948.g Linum usitatissimum Lus10016948.g I 0.665
Pavir.Ba01213 Panicum virgatum Pavir.Ba01213 I 0.679
orange1.1g044864m.g Citrus sinensis orange1.1g044864m.g I 0.748
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.675
orange1.1g023056m.g Citrus sinensis orange1.1g023056m.g I 0.674
orange1.1g021503m.g Citrus sinensis orange1.1g021503m.g I 0.665
MDP0000872821 Malus domestica MDP0000872821 I 0.791
MDP0000791870 Malus domestica MDP0000791870 I 0.675
MDP0000723614 Malus domestica MDP0000723614 I 0.675
MDP0000655330 Malus domestica MDP0000655330 I 0.675
MDP0000250597 Malus domestica MDP0000250597 I 0.759
MDP0000249611 Malus domestica MDP0000249611 I 0.682
MDP0000211677 Malus domestica MDP0000211677 I 0.703
MDP0000209761 Malus domestica MDP0000209761 I 0.724
MDP0000159011 Malus domestica MDP0000159011 I 0.729
gene09407-v1.0-hybrid Fragaria vesca gene09407-v1.0-hybrid I 0.786
OB08G29560 Oryza brachyantha OB08G29560 I 0.667
GSMUA_Achr3G22200_001 Musa acuminata GSMUA_Achr3G22200_001 I 0.686
GSMUA_Achr3G21000_001 Musa acuminata GSMUA_Achr3G21000_001 I 0.724
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.665
GSMUA_Achr2G20600_001 Musa acuminata GSMUA_Achr2G20600_001 I 0.689
GSMUA_Achr1G26520_001 Musa acuminata GSMUA_Achr1G26520_001 I 0.678
GSMUA_Achr10G19970_001 Musa acuminata GSMUA_Achr10G19970_001 I 0.689
GSMUA_Achr10G16010_001 Musa acuminata GSMUA_Achr10G16010_001 I 0.698
GSMUA_Achr10G04590_001 Musa acuminata GSMUA_Achr10G04590_001 I 0.678
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.682
GRMZM2G124715 Zea mays GRMZM2G124715 I 0.670
GRMZM2G089244 Zea mays GRMZM2G089244 I 0.676
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.679
GLYMA20G01610 Glycine max GLYMA20G01610 I 0.771
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.675
GSMUA_Achr5G17010_001 Musa acuminata GSMUA_Achr5G17010_001 I 0.696
GSMUA_Achr5G26000_001 Musa acuminata GSMUA_Achr5G26000_001 I 0.664
GSMUA_Achr6G07260_001 Musa acuminata GSMUA_Achr6G07260_001 I 0.716
MTR_5g079670 Medicago truncatula MTR_5g079670 I 0.720
MTR_4g485530 Medicago truncatula MTR_4g485530 I 0.735
MTR_4g073420 Medicago truncatula MTR_4g073420 I 0.682
MTR_3g097450 Medicago truncatula MTR_3g097450 I 0.687
MTR_3g083540 Medicago truncatula MTR_3g083540 I 0.675
MLOC_65957 Hordeum vulgare MLOC_65957 I 0.688
LPERR11G04310 Leersia perrieri LPERR11G04310 I 0.691
GSMUA_AchrUn_randomG16400_001 Musa acuminata GSMUA_AchrUn_randomG16400_001 I 0.705
GSMUA_Achr9G24180_001 Musa acuminata GSMUA_Achr9G24180_001 I 0.673
GSMUA_Achr9G08600_001 Musa acuminata GSMUA_Achr9G08600_001 I 0.716
GSMUA_Achr8G33900_001 Musa acuminata GSMUA_Achr8G33900_001 I 0.675
GSMUA_Achr8G32480_001 Musa acuminata GSMUA_Achr8G32480_001 I 0.667
GSMUA_Achr6G25420_001 Musa acuminata GSMUA_Achr6G25420_001 I 0.712
GSMUA_Achr6G12930_001 Musa acuminata GSMUA_Achr6G12930_001 I 0.686
GLYMA14G07510 Glycine max GLYMA14G07510 I 0.670
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.675
GLYMA12G03600 Glycine max GLYMA12G03600 I 0.682
Bra010736 Brassica rapa Bra010736 I 0.679
Bo8g071580 Brassica oleracea Bo8g071580 I 0.703
Bo7g119670 Brassica oleracea Bo7g119670 I 0.682
Bo7g117140 Brassica oleracea Bo7g117140 I 0.680
Bo7g057770 Brassica oleracea Bo7g057770 I 0.703
Bo5g038720 Brassica oleracea Bo5g038720 I 0.683
Bo3g149450 Brassica oleracea Bo3g149450 I 0.679
BGIOSGA034924 Oryza indica BGIOSGA034924 I 0.691
BGIOSGA029363 Oryza indica BGIOSGA029363 I 0.682
BGIOSGA026527 Oryza indica BGIOSGA026527 I 0.667
BGIOSGA026525 Oryza indica BGIOSGA026525 I 0.667
MYB32 Arabidopsis thaliana AT4G34990 I 0.671
AMTR_s00139p00079430 Amborella trichopoda AMTR_s00139p00079430 I 0.691
AMTR_s00055p00057500 Amborella trichopoda AMTR_s00055p00057500 I 0.661
Bra011576 Brassica rapa Bra011576 I 0.668
Bra012337 Brassica rapa Bra012337 I 0.703
Bra017685 Brassica rapa Bra017685 I 0.680
GLYMA11G11450 Glycine max GLYMA11G11450 I 0.682
GLYMA07G33960 Glycine max GLYMA07G33960 I 0.774
GLYMA06G16820 Glycine max GLYMA06G16820 I 0.678
GLYMA06G00630 Glycine max GLYMA06G00630 I 0.665
GLYMA04G38240 Glycine max GLYMA04G38240 I 0.678
GLYMA04G00550 Glycine max GLYMA04G00550 I 0.665
GLYMA02G41440 Glycine max GLYMA02G41440 I 0.733
ATMYB4 Arabidopsis lyrata fgenesh2_kg.7__59__AT4G38620.1 I 0.682
ATMYB3 Arabidopsis lyrata fgenesh2_kg.1__2457__AT1G22640.1 I 0.703
F775_31191 Aegilops tauschii F775_31191 I 0.662
BRADI4G36460 Brachypodium distachyon BRADI4G36460 I 0.679
BRADI4G23967 Brachypodium distachyon BRADI4G23967 I 0.679
Bra033572 Brassica rapa Bra033572 I 0.682
Bra024526 Brassica rapa Bra024526 I 0.683
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.762
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.771
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.664
Si030943m.g Setaria italica Si030943m.g I 0.679
Si026734m.g Setaria italica Si026734m.g I 0.666
Si015081m.g Setaria italica Si015081m.g I 0.664
Si012585m.g Setaria italica Si012585m.g I 0.667
Si012017m.g Setaria italica Si012017m.g I 0.667
Si011098m.g Setaria italica Si011098m.g I 0.667
AtMYB32 Arabidopsis lyrata scaffold_700628.1 I 0.671
Sb07g024890 Sorghum bicolor Sb07g024890 I 0.667
Sb02g031190 Sorghum bicolor Sb02g031190 I 0.679
PRUPE_ppa019522mg Prunus persica PRUPE_ppa019522mg I 0.813
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.666
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.686
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.735
Solyc01g111500.2 Solanum lycopersicum Solyc01g111500.2 I 0.682
Solyc05g008250.1 Solanum lycopersicum Solyc05g008250.1 I 0.764
Solyc06g065100.2 Solanum lycopersicum Solyc06g065100.2 I 0.691
TRIUR3_11890 Triticum urartu TRIUR3_11890 I 0.662
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.667
Traes_5DL_1868E2A6C Triticum aestivum Traes_5DL_1868E2A6C I 0.662
Traes_5BL_AED68C680 Triticum aestivum Traes_5BL_AED68C680 I 0.662
Traes_5AL_56F30392D Triticum aestivum Traes_5AL_56F30392D I 0.662
Traes_4DS_7BFAC49C2 Triticum aestivum Traes_4DS_7BFAC49C2 I 0.691
Traes_4BS_6253482BD Triticum aestivum Traes_4BS_6253482BD I 0.691
Traes_4AL_CC5803BED Triticum aestivum Traes_4AL_CC5803BED I 0.691
TCM_036404 Theobroma cacao TCM_036404 I 0.691
TCM_019261 Theobroma cacao TCM_019261 I 0.738
TCM_012631 Theobroma cacao TCM_012631 I 0.748
TCM_010839 Theobroma cacao TCM_010839 I 0.762
TCM_006638 Theobroma cacao TCM_006638 I 0.682
Solyc10g055410.1 Solanum lycopersicum Solyc10g055410.1 I 0.682
PRUPE_ppa010846mg Prunus persica PRUPE_ppa010846mg I 0.748
PRUPE_ppa010716mg Prunus persica PRUPE_ppa010716mg I 0.738
PRUPE_ppa010277mg Prunus persica PRUPE_ppa010277mg I 0.682
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.682
OS11G0180900 Oryza sativa OS11G0180900 I 0.667
OS09G0538400 Oryza sativa OS09G0538400 I 0.682
ORUFI11G04860 Oryza rufipogon ORUFI11G04860 I 0.691
ORUFI09G19350 Oryza rufipogon ORUFI09G19350 I 0.682
ORUFI08G25300 Oryza rufipogon ORUFI08G25300 I 0.667
ORGLA11G0047500 Oryza glaberrima ORGLA11G0047500 I 0.691
ORGLA09G0141200 Oryza glaberrima ORGLA09G0141200 I 0.682
ORGLA08G0216900 Oryza glaberrima ORGLA08G0216900 I 0.667
OPUNC11G04750 Oryza punctata OPUNC11G04750 I 0.691
ONIVA11G05280 Oryza nivara ONIVA11G05280 I 0.691
OGLUM11G04790 Oryza glumaepatula OGLUM11G04790 I 0.691
OBART11G04950 Oryza barthii OBART11G04950 I 0.691
OB11G14080 Oryza brachyantha OB11G14080 I 0.691
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.682
PGSC0003DMG400030548 Solanum tuberosum PGSC0003DMG400030548 I 0.760
PGSC0003DMG400031317 Solanum tuberosum PGSC0003DMG400031317 I 0.691
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.691
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.675
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.682
POPTR_0019s00750 Populus trichocarpa POPTR_0019s00750 I 0.661
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.707
POPTR_0015s04300 Populus trichocarpa POPTR_0015s04300 I 0.753
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.675
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.771
POPTR_0009s13640 Populus trichocarpa POPTR_0009s13640 I 0.679
POPTR_0008s12750 Populus trichocarpa POPTR_0008s12750 I 0.760
POPTR_0004s18020 Populus trichocarpa POPTR_0004s18020 I 0.682
POPTR_0004s08650 Populus trichocarpa POPTR_0004s08650 I 0.700
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.675
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.675
OB09G24400 Oryza brachyantha OB09G24400 I 0.682