MDP0000537324 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000537324 T288639_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.691 0.796
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.691 0.796
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.675 0.699
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.674 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000537324 Myb 9 56
MDP0000537324 Myb 62 107

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.830
MDP0000164048 Malus domestica MDP0000164048 I 0.826
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.823
MDP0000199965 Malus domestica MDP0000199965 I 0.818
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.797
Pm006678 Prunus mume Pm006678 I 0.786
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.783
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.776
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.776
TCM_010360 Theobroma cacao TCM_010360 I 0.765
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N 0.758
Pm024725 Prunus mume Pm024725 I 0.748
MDP0000650225 Malus domestica MDP0000650225 I 0.747
TCM_012057 Theobroma cacao TCM_012057 I 0.744
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.742
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.741
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.734
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.732
MDP0000578193 Malus domestica MDP0000578193 I 0.729
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.721
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.720
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.715
TCM_016886 Theobroma cacao TCM_016886 I 0.713
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.711
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.706
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.704
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.699
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.698
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.698
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.698
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.698
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.696
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.692
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.691
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.691
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.691
WER Arabidopsis thaliana AT5G14750 D 0.691
Bo2g012170 Brassica oleracea Bo2g012170 I 0.691
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.691
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.691
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.690
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.690
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.689
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.686
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.677
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.676
GL1 Arabidopsis thaliana AT3G27920 I 0.676
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.676
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.676
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.675
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.675
Bra025311 Brassica rapa Bra025311 I 0.675
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.675
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.675
Bra008740 Brassica rapa Bra008740 I 0.674
Bra025589 Brassica rapa Bra025589 I 0.674
Bo9g165670 Brassica oleracea Bo9g165670 I 0.674
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.674
MYB23 Arabidopsis thaliana AT5G40330 D 0.674
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.674
GSMUA_Achr2G04730_001 Musa acuminata GSMUA_Achr2G04730_001 I 0.674
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.674
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.674
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.674
GSMUA_Achr10G19970_001 Musa acuminata GSMUA_Achr10G19970_001 I 0.672
Pm005573 Prunus mume Pm005573 I 0.670
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.670
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.668
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.664
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.664
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.664
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.664
Bo7g090950 Brassica oleracea Bo7g090950 I 0.663
MDP0000266683 Malus domestica MDP0000266683 I 0.662
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.661