CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000537324
(
Malus domestica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
MDP0000537324
T288639_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WER
M11047_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.691
0.796
WER
M11048_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.691
0.796
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.675
0.699
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.674
0.796
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000537324
Myb
9
56
KGLWTKEEDEILLDYIRVHGRGRWNRIPKVTGLRRSGKSCRLRWLNHL
MDP0000537324
Myb
62
107
RGDFSEEEEDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Malus domestica
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10032713m.g
Citrus clementina
Ciclev10032713m.g
I
0.830
MDP0000164048
Malus domestica
MDP0000164048
I
0.826
VIT_01s0127g00730
Vitis vinifera
VIT_01s0127g00730
I
0.823
MDP0000199965
Malus domestica
MDP0000199965
I
0.818
PRUPE_ppa014884mg
Prunus persica
PRUPE_ppa014884mg
I
0.797
Pm006678
Prunus mume
Pm006678
I
0.786
orange1.1g047269m.g
Citrus sinensis
orange1.1g047269m.g
I
0.783
Aquca_002_00170
Aquilegia coerulea
Aquca_002_00170
I
0.776
Aquca_025_00333
Aquilegia coerulea
Aquca_025_00333
I
0.776
TCM_010360
Theobroma cacao
TCM_010360
I
0.765
Eucgr.B03324
Eucalyptus grandis
Eucgr.B03324
N
0.758
Pm024725
Prunus mume
Pm024725
I
0.748
MDP0000650225
Malus domestica
MDP0000650225
I
0.747
TCM_012057
Theobroma cacao
TCM_012057
I
0.744
VIT_17s0000g08480
Vitis vinifera
VIT_17s0000g08480
I
0.742
cassava26193.m1
Manihot esculenta
cassava26193.m1
I
0.741
PRUPE_ppa010908mg
Prunus persica
PRUPE_ppa010908mg
I
0.734
cassava27350.m1
Manihot esculenta
cassava27350.m1
I
0.732
MDP0000578193
Malus domestica
MDP0000578193
I
0.729
evm.TU.supercontig_124.57
Carica papaya
evm.TU.supercontig_124.57
I
0.721
Eucgr.I01791
Eucalyptus grandis
Eucgr.I01791
I
0.720
Eucgr.B00373
Eucalyptus grandis
Eucgr.B00373
I
0.715
TCM_016886
Theobroma cacao
TCM_016886
I
0.713
POPTR_0012s08190
Populus trichocarpa
POPTR_0012s08190
I
0.711
SapurV1A.1178s0050
Salix purpurea
SapurV1A.1178s0050
I
0.706
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.704
VIT_14s0066g01220
Vitis vinifera
VIT_14s0066g01220
I
0.699
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.698
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.698
gene32181-v1.0-hybrid
Fragaria vesca
gene32181-v1.0-hybrid
I
0.698
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.698
SapurV1A.1404s0020
Salix purpurea
SapurV1A.1404s0020
I
0.696
Eucgr.J02212
Eucalyptus grandis
Eucgr.J02212
I
0.692
Cagra.3166s0078
Capsella grandiflora
Cagra.3166s0078
I
0.691
Bostr.2902s0211
Boechera stricta
Bostr.2902s0211
I
0.691
Carubv10001990m.g
Capsella rubella
Carubv10001990m.g
I
0.691
WER
Arabidopsis thaliana
AT5G14750
D
0.691
Bo2g012170
Brassica oleracea
Bo2g012170
I
0.691
WER
Arabidopsis lyrata
fgenesh2_kg.6__1454__AT5G14750.1
I
0.691
Thhalv10014715m.g
Eutrema salsugineum
Thhalv10014715m.g
I
0.691
Thhalv10005428m.g
Eutrema salsugineum
Thhalv10005428m.g
I
0.690
Gorai.007G001800
Gossypium raimondii
Gorai.007G001800
I
0.690
cassava33302.m1
Manihot esculenta
cassava33302.m1
I
0.689
Gorai.012G061800
Gossypium raimondii
Gorai.012G061800
I
0.686
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.677
Carubv10018791m.g
Capsella rubella
Carubv10018791m.g
I
0.676
GL1
Arabidopsis thaliana
AT3G27920
I
0.676
Cagra.4961s0006
Capsella grandiflora
Cagra.4961s0006
I
0.676
GL1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000559
I
0.676
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.675
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.675
Bra025311
Brassica rapa
Bra025311
I
0.675
POPTR_0015s08680
Populus trichocarpa
POPTR_0015s08680
I
0.675
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.675
Bra008740
Brassica rapa
Bra008740
I
0.674
Bra025589
Brassica rapa
Bra025589
I
0.674
Bo9g165670
Brassica oleracea
Bo9g165670
I
0.674
Thhalv10028340m.g
Eutrema salsugineum
Thhalv10028340m.g
I
0.674
MYB23
Arabidopsis thaliana
AT5G40330
D
0.674
Bostr.7200s0005
Boechera stricta
Bostr.7200s0005
I
0.674
GSMUA_Achr2G04730_001
Musa acuminata
GSMUA_Achr2G04730_001
I
0.674
Bostr.1460s0063
Boechera stricta
Bostr.1460s0063
I
0.674
Cagra.3160s0003
Capsella grandiflora
Cagra.3160s0003
I
0.674
Carubv10005698m.g
Capsella rubella
Carubv10005698m.g
I
0.674
GSMUA_Achr10G19970_001
Musa acuminata
GSMUA_Achr10G19970_001
I
0.672
Pm005573
Prunus mume
Pm005573
I
0.670
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.670
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.668
cassava9944.m1
Manihot esculenta
cassava9944.m1
I
0.664
VIT_00s0341g00050
Vitis vinifera
VIT_00s0341g00050
N
0.664
Eucgr.E00407
Eucalyptus grandis
Eucgr.E00407
N
0.664
Eucgr.K01504
Eucalyptus grandis
Eucgr.K01504
I
0.664
Bo7g090950
Brassica oleracea
Bo7g090950
I
0.663
MDP0000266683
Malus domestica
MDP0000266683
I
0.662
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.661