MDP0000578193 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000578193 T288649_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WER
M11047_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.776 0.849
WER
M11048_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.776 0.849
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH

DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.714 0.839
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000578193 Myb 10 57
MDP0000578193 Myb 63 108

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB23 Arabidopsis thaliana AT5G40330 D 0.714
WER Arabidopsis thaliana AT5G14750 D 0.776
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.671
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.700
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.715
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.805
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.677
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.669
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.670
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.734
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.793
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.813
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.716
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.714
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.775
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.769
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.692
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.753
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.776
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.714
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.714
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.776
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.716
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.776
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.698
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.671
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.715
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.811
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.792
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.764
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.776
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.689
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.714
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.663
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.764
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.670
MDP0000650225 Malus domestica MDP0000650225 I 0.862
MDP0000537324 Malus domestica MDP0000537324 I 0.729
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.669
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.784
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.667
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.671
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.793
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.718
MDP0000164048 Malus domestica MDP0000164048 I 0.709
MDP0000199965 Malus domestica MDP0000199965 I 0.716
MDP0000266683 Malus domestica MDP0000266683 I 0.776
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.669
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.669
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.776
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.661
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.670
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.661
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.669
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.677
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.670
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.663
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.806
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.716
Bra039065 Brassica rapa Bra039065 I 0.677
Bra025589 Brassica rapa Bra025589 I 0.714
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.681
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.680
GL1 Arabidopsis thaliana AT3G27920 I 0.716
Bo2g012170 Brassica oleracea Bo2g012170 I 0.776
Bo7g090950 Brassica oleracea Bo7g090950 I 0.737
Bo9g165670 Brassica oleracea Bo9g165670 I 0.759
Bra008740 Brassica rapa Bra008740 I 0.759
Bra023486 Brassica rapa Bra023486 I 0.740
Bra025311 Brassica rapa Bra025311 I 0.748
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.789
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.735
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.662
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.673
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.774
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.857
Pm006678 Prunus mume Pm006678 I 0.699
Pm024725 Prunus mume Pm024725 I 0.867
Pm027045 Prunus mume Pm027045 I 0.689
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.849
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.714
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.712
TCM_037377 Theobroma cacao TCM_037377 I 0.673
TCM_016886 Theobroma cacao TCM_016886 I 0.756
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.873
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.699
Si038905m.g Setaria italica Si038905m.g I 0.673
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.673
TCM_000535 Theobroma cacao TCM_000535 I 0.675
TCM_004509 Theobroma cacao TCM_004509 I 0.669
TCM_010360 Theobroma cacao TCM_010360 I 0.691
TCM_012057 Theobroma cacao TCM_012057 I 0.843
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.677
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N 0.670
SapurV1A.1178s0040 Salix purpurea SapurV1A.1178s0040 N 0.690
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.664