MDP0000809640 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000809640 T288708_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G11280
M01075_2.00
Arabidopsis thaliana
NNTTATCNNN

NNNGATAANN
PBM
Sullivan et al.(2014)
pTH7245
0.697 0.802
AT3G11280
M07074_2.00
Arabidopsis thaliana
DWDWDGATAAKRWW

WWYMTTATCHWHWH
Dap-seq
OMalley et al.(2016)
At3g11280_col_a
0.697 0.802
AT3G11280
M07075_2.00
Arabidopsis thaliana
NNWNNDGATAAGRWHDNN

NNHDWYCTTATCHNNWNN
Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a
0.697 0.802
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000809640 Myb 17 65
MDP0000809640 Myb 119 164

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000277813 Malus domestica MDP0000277813 I 0.838
PRUPE_ppa018139mg Prunus persica PRUPE_ppa018139mg I 0.799
Pm018878 Prunus mume Pm018878 I 0.799
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I 0.743
PK15104.1 Cannabis sativa PK15104.1 I 0.717
cassava1257.valid.m1 Manihot esculenta cassava1257.valid.m1 I 0.715
29610.m000410 Ricinus communis 29610.m000410 I 0.709
Bo5g136680 Brassica oleracea Bo5g136680 I 0.707
Thhalv10021322m.g Eutrema salsugineum Thhalv10021322m.g I 0.707
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I 0.704
SapurV1A.0262s0080 Salix purpurea SapurV1A.0262s0080 I 0.702
cassava26873.m1 Manihot esculenta cassava26873.m1 I 0.702
POPTR_0010s20040 Populus trichocarpa POPTR_0010s20040 I 0.702
orange1.1g023196m.g Citrus sinensis orange1.1g023196m.g I 0.699
Bra034173 Brassica rapa Bra034173 I 0.697
AT3G11280 Arabidopsis thaliana AT3G11280 D 0.697
Bra034853 Brassica rapa Bra034853 I 0.697
fgenesh2_kg.3__1170__AT3G11280.1 Arabidopsis lyrata fgenesh2_kg.3__1170__AT3G11280.1 I 0.697
Bo1g141120 Brassica oleracea Bo1g141120 I 0.697
VIT_13s0019g03370 Vitis vinifera VIT_13s0019g03370 I 0.694
SapurV1A.0709s0190 Salix purpurea SapurV1A.0709s0190 I 0.694
Carubv10014411m.g Capsella rubella Carubv10014411m.g I 0.686
Bostr.19424s1061 Boechera stricta Bostr.19424s1061 I 0.686
Cagra.1655s0043 Capsella grandiflora Cagra.1655s0043 I 0.686
Solyc05g052610.2 Solanum lycopersicum Solyc05g052610.2 I 0.682
Ciclev10032309m.g Citrus clementina Ciclev10032309m.g I 0.682
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.682
Cla018399 Citrullus lanatus Cla018399 I 0.677
Cucsa.067080 Cucumis sativus Cucsa.067080 I 0.677
mgf010347m Mimulus guttatus mgf010347m I 0.675
Ca_12513 Cicer arietinum Ca_12513 I 0.671
Solyc03g096350.2 Solanum lycopersicum Solyc03g096350.2 I 0.670