MDP0000841703 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000841703 T288719_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.696 0.897
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.696 0.897
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.679 0.885
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000841703 Myb 39 86
MDP0000841703 Myb 92 122

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30064.m000484 Ricinus communis 30064.m000484 N 0.845
cassava33620.m1 Manihot esculenta cassava33620.m1 N 0.789
SELMODRAFT_93784 Selaginella moellendorffii SELMODRAFT_93784 N 0.783
OPUNC01G33690 Oryza punctata OPUNC01G33690 I 0.768
ORGLA05G0183100 Oryza glaberrima ORGLA05G0183100 N 0.747
OLONG_003390 Oryza longistaminata OLONG_003390 N 0.743
Traes_1DL_57F246ADF Triticum aestivum Traes_1DL_57F246ADF N 0.720
Eucgr.F03475 Eucalyptus grandis Eucgr.F03475 N 0.707
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.704
Pm016605 Prunus mume Pm016605 I 0.704
GSMUA_Achr7G21550_001 Musa acuminata GSMUA_Achr7G21550_001 N 0.698
F775_09422 Aegilops tauschii F775_09422 N 0.696
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.696
Gam1 Hordeum vulgare Q96464_HORVU D 0.696
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.696
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.696
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.696
Sb03g037680 Sorghum bicolor Sb03g037680 I 0.696
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.696
F775_28392 Aegilops tauschii F775_28392 I 0.696
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.695
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.695
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I 0.693
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.692
MDP0000253886 Malus domestica MDP0000253886 N 0.689
Si000907m.g Setaria italica Si000907m.g I 0.687
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.687
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I 0.685
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.685
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I 0.685
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I 0.681
GSMUA_AchrUn_randomG15100_001 Musa acuminata GSMUA_AchrUn_randomG15100_001 I 0.681
TCM_044611 Theobroma cacao TCM_044611 I 0.680
mgf002965m Mimulus guttatus mgf002965m I 0.680
POPTR_0003s18900 Populus trichocarpa POPTR_0003s18900 I 0.680
Gorai.010G212500 Gossypium raimondii Gorai.010G212500 I 0.680
Gorai.009G301100 Gossypium raimondii Gorai.009G301100 I 0.680
POPTR_0001s07330 Populus trichocarpa POPTR_0001s07330 I 0.680
OB01G43550 Oryza brachyantha OB01G43550 I 0.679
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.679
GAM1 Oryza indica BGIOSGA004670 I 0.679
OBART01G34660 Oryza barthii OBART01G34660 I 0.679
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.679
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.679
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.679
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.679
GAMYB Oryza sativa OS01G0812000 I 0.679
evm.TU.supercontig_33.151 Carica papaya evm.TU.supercontig_33.151 I 0.675
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I 0.675
PK17293.1 Cannabis sativa PK17293.1 I 0.675
29686.m000890 Ricinus communis 29686.m000890 I 0.675
cassava1461.valid.m1 Manihot esculenta cassava1461.valid.m1 I 0.675
MDP0000147309 Malus domestica MDP0000147309 I 0.674
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.673
Gorai.012G022000 Gossypium raimondii Gorai.012G022000 I 0.671
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I 0.670
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I 0.670
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.670
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.670
Thhalv10013329m.g Eutrema salsugineum Thhalv10013329m.g I 0.665
OS06G0605750 Oryza sativa OS06G0605750 N 0.665
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I 0.663
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I 0.663
Bostr.13129s0364 Boechera stricta Bostr.13129s0364 I 0.662
Cagra.2117s0052 Capsella grandiflora Cagra.2117s0052 I 0.662
Carubv10000715m.g Capsella rubella Carubv10000715m.g I 0.662
Cucsa.364400 Cucumis sativus Cucsa.364400 I 0.662