MDP0000878701 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000878701 T288734_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.909 0.989
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.909 0.989
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD

HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000878701 Myb 7 53
MDP0000878701 Myb 59 103

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CIMG_00643 Coccidioides immitis CIMG_00643 N 0.000
GNLVRS01_PISO0J05091g Millerozyma farinosa GNLVRS01_PISO0J05091g N 0.000
GSTUM_00011353001 Tuber melanosporum GSTUM_00011353001 N 0.000
H072_372 Dactylellina haptotyla H072_372 N 0.000
LELG_03603 Lodderomyces elongisporus LELG_03603 N 0.000
PAS_chr1-4_0395 Komagataella pastoris PAS_chr1-4_0395 N 0.000
PGUG_05113 Meyerozyma guilliermondii PGUG_05113 N 0.000
PICST_30840 Scheffersomyces stipitis PICST_30840 N 0.000
SPAPADRAFT_55830 Spathaspora passalidarum SPAPADRAFT_55830 N 0.000
UREG_00647 Uncinocarpus reesii UREG_00647 N 0.000
YALI0_E05555g Yarrowia lipolytica YALI0_E05555g N 0.000
estExt_fgeneshPB_pg.C_200193 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_200193 N 0.000
fgenesh1_pg.C_chr_3.1000427 Pichia stipitis fgenesh1_pg.C_chr_3.1000427 N 0.000
GNLVRS01_PISO0I03308g Millerozyma farinosa GNLVRS01_PISO0I03308g N 0.000
G210_5573 Candida maltosa G210_5573 N 0.000
DRE_00816 Drechslerella stenobrocha DRE_00816 N 0.000
CLUG_03835 Candida lusitaniae CLUG_03835 N 0.000
CPAG_04289 Candida parapsilosis CPAG_04289 N 0.000
PGUG_05113 Candida guilliermondii PGUG_05113 N 0.000
AOL_s00006g402 Arthrobotrys oligospora AOL_s00006g402 N 0.000
CaO19.12333 Candida albicans CaO19.12333 N 0.000
CaO19.4869 Candida albicans CaO19.4869 N 0.000
CD36_09420 Candida dubliniensis CD36_09420 N 0.000
CLUG_03835 Clavispora lusitaniae CLUG_03835 N 0.000
CORT_0G00970 Candida orthopsilosis CORT_0G00970 N 0.000
CPC735_056160 Coccidioides posadasii CPC735_056160 N 0.000
CTRG_03356 Candida tropicalis CTRG_03356 N 0.000
DEHA2D02992g Debaryomyces hansenii DEHA2D02992g N 0.000
XP_002490521.1 Pichia pastoris XP_002490521.1 N 0.000