MDP0000950559 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000950559 T288754_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.676 0.761
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.676 0.761
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000950559 Myb 14 61
MDP0000950559 Myb 67 112

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB4 Arabidopsis thaliana AT4G38620 D 0.676
PK29029.1 Cannabis sativa PK29029.1 I 0.688
VIT_03s0038g02310 Vitis vinifera VIT_03s0038g02310 I 0.688
Ca_11026 Cicer arietinum Ca_11026 I 0.688
Cla020592 Citrullus lanatus Cla020592 I 0.679
Pm020852 Prunus mume Pm020852 I 0.688
29602.m000218 Ricinus communis 29602.m000218 I 0.688
cassava29150.valid.m1 Manihot esculenta cassava29150.valid.m1 I 0.688
cassava30431.valid.m1 Manihot esculenta cassava30431.valid.m1 I 0.688
TRIUR3_11890 Triticum urartu TRIUR3_11890 I 0.668
Traes_5DL_1868E2A6C Triticum aestivum Traes_5DL_1868E2A6C I 0.668
Traes_5BL_AED68C680 Triticum aestivum Traes_5BL_AED68C680 I 0.668
Traes_5AL_56F30392D Triticum aestivum Traes_5AL_56F30392D I 0.668
Traes_4DS_7BFAC49C2 Triticum aestivum Traes_4DS_7BFAC49C2 I 0.679
Traes_4BS_6253482BD Triticum aestivum Traes_4BS_6253482BD I 0.679
Traes_4AL_CC5803BED Triticum aestivum Traes_4AL_CC5803BED I 0.679
TCM_006638 Theobroma cacao TCM_006638 I 0.688
Solyc10g055410.1 Solanum lycopersicum Solyc10g055410.1 I 0.679
Cucsa.234310 Cucumis sativus Cucsa.234310 I 0.679
mgf012705m Mimulus guttatus mgf012705m I 0.688
Aquca_006_00250 Aquilegia coerulea Aquca_006_00250 I 0.667
Thhalv10025886m.g Eutrema salsugineum Thhalv10025886m.g I 0.679
SapurV1A.0923s0040 Salix purpurea SapurV1A.0923s0040 I 0.685
Pavir.Bb02469 Panicum virgatum Pavir.Bb02469 I 0.685
Pavir.Ba01213 Panicum virgatum Pavir.Ba01213 I 0.685
orange1.1g023056m.g Citrus sinensis orange1.1g023056m.g I 0.662
orange1.1g021503m.g Citrus sinensis orange1.1g021503m.g I 0.671
MDP0000249611 Malus domestica MDP0000249611 I 0.688
Gorai.008G035700 Gossypium raimondii Gorai.008G035700 I 0.688
Gorai.005G254000 Gossypium raimondii Gorai.005G254000 I 0.684
Gorai.002G196700 Gossypium raimondii Gorai.002G196700 I 0.688
gene07646-v1.0-hybrid Fragaria vesca gene07646-v1.0-hybrid I 0.688
evm.TU.supercontig_37.149 Carica papaya evm.TU.supercontig_37.149 I 0.688
Eucgr.I01406 Eucalyptus grandis Eucgr.I01406 I 0.679
Ciclev10028908m.g Citrus clementina Ciclev10028908m.g I 0.671
Ciclev10002068m.g Citrus clementina Ciclev10002068m.g I 0.662
Bostr.25542s0045 Boechera stricta Bostr.25542s0045 I 0.679
Solyc06g065100.2 Solanum lycopersicum Solyc06g065100.2 I 0.673
Si030943m.g Setaria italica Si030943m.g I 0.685
Sb02g031190 Sorghum bicolor Sb02g031190 I 0.685
GSMUA_Achr3G22200_001 Musa acuminata GSMUA_Achr3G22200_001 I 0.674
GSMUA_Achr1G02420_001 Musa acuminata GSMUA_Achr1G02420_001 I 0.664
GSMUA_Achr10G04590_001 Musa acuminata GSMUA_Achr10G04590_001 I 0.675
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.679
GLYMA12G03600 Glycine max GLYMA12G03600 I 0.688
GLYMA11G11450 Glycine max GLYMA11G11450 I 0.688
ATMYB4 Arabidopsis lyrata fgenesh2_kg.7__59__AT4G38620.1 I 0.679
F775_31191 Aegilops tauschii F775_31191 I 0.668
BRADI4G36460 Brachypodium distachyon BRADI4G36460 I 0.685
BRADI4G23967 Brachypodium distachyon BRADI4G23967 I 0.676
Bra033572 Brassica rapa Bra033572 I 0.679
Bra010736 Brassica rapa Bra010736 I 0.676
Bo7g119670 Brassica oleracea Bo7g119670 I 0.679
Bo3g149450 Brassica oleracea Bo3g149450 I 0.676
BGIOSGA034924 Oryza indica BGIOSGA034924 I 0.679
BGIOSGA029363 Oryza indica BGIOSGA029363 I 0.688
GSMUA_Achr8G33900_001 Musa acuminata GSMUA_Achr8G33900_001 I 0.681
GSMUA_Achr9G24180_001 Musa acuminata GSMUA_Achr9G24180_001 I 0.679
LPERR11G04310 Leersia perrieri LPERR11G04310 I 0.679
PRUPE_ppa010277mg Prunus persica PRUPE_ppa010277mg I 0.688
POPTR_0009s13640 Populus trichocarpa POPTR_0009s13640 I 0.685
PGSC0003DMG400031317 Solanum tuberosum PGSC0003DMG400031317 I 0.673
OS09G0538400 Oryza sativa OS09G0538400 I 0.688
ORUFI11G04860 Oryza rufipogon ORUFI11G04860 I 0.679
ORUFI09G19350 Oryza rufipogon ORUFI09G19350 I 0.688
ORGLA11G0047500 Oryza glaberrima ORGLA11G0047500 I 0.679
ORGLA09G0141200 Oryza glaberrima ORGLA09G0141200 I 0.688
OPUNC11G04750 Oryza punctata OPUNC11G04750 I 0.679
ONIVA11G05280 Oryza nivara ONIVA11G05280 I 0.679
OGLUM11G04790 Oryza glumaepatula OGLUM11G04790 I 0.679
OBART11G04950 Oryza barthii OBART11G04950 I 0.679
OB11G14080 Oryza brachyantha OB11G14080 I 0.679
OB09G24400 Oryza brachyantha OB09G24400 I 0.688
MTR_4g073420 Medicago truncatula MTR_4g073420 I 0.688
MLOC_65957 Hordeum vulgare MLOC_65957 I 0.676
AMTR_s00139p00079430 Amborella trichopoda AMTR_s00139p00079430 I 0.679