orange1.1g007940m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g007940m.g T288769_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07924.1
M01278_2.00
Cannabis sativa
NGATHYNNN

NNNRDATCN
PBM
Lambert et al.(2019)
pTH11431
0.875 0.979
ARR11
M00872_2.00
Arabidopsis thaliana
NRATHHNNN

NNNDDATYN
PBM
Franco-Zorrilla et al.(2014)
ARR11
0.767 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g007940m Myb 202 252
orange1.1g011273m Myb 107 157

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I 0.909
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I 0.909
Pm006838 Prunus mume Pm006838 I 0.875
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.875
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.875
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.875
Cla023064 Citrullus lanatus Cla023064 I 0.875
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.875
TCM_010701 Theobroma cacao TCM_010701 I 0.875
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.875
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.875
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.875
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.875
MDP0000320381 Malus domestica MDP0000320381 I 0.875
PK07924.1 Cannabis sativa PK07924.1 D 0.875
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.875
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.875
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.875
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.875
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.875
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.873
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.863
Si000815m.g Setaria italica Si000815m.g I 0.863
RR26 Oryza sativa OS01G0904700 I 0.863
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.863
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.863
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.863
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.863
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.863
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.863
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.863
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.863
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.863
OBART01G40940 Oryza barthii OBART01G40940 I 0.863
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.863
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.863
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.863
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.863
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.863
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.863
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.863
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.863
F775_27736 Aegilops tauschii F775_27736 I 0.863
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.863
OB01G49660 Oryza brachyantha OB01G49660 I 0.863
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.863
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.863
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.863
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I 0.857
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I 0.857
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I 0.839
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.824
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.824
MDP0000307383 Malus domestica MDP0000307383 I 0.822
MDP0000305167 Malus domestica MDP0000305167 I 0.822
mgf000016m Mimulus guttatus mgf000016m I 0.820
Ca_11309 Cicer arietinum Ca_11309 I 0.815
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I 0.813
Thhalv10018396m.g Eutrema salsugineum Thhalv10018396m.g I 0.786
Bo6g098710 Brassica oleracea Bo6g098710 I 0.786
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I 0.786
Bo6g105120 Brassica oleracea Bo6g105120 I 0.786
Carubv10020133m.g Capsella rubella Carubv10020133m.g I 0.786
Bostr.26959s0139 Boechera stricta Bostr.26959s0139 I 0.786
Lus10011389.g Linum usitatissimum Lus10011389.g I 0.786
Bra004245 Brassica rapa Bra004245 I 0.786
29929.m004752 Ricinus communis 29929.m004752 I 0.786
Lus10006446.g Linum usitatissimum Lus10006446.g I 0.786
ARR11 Arabidopsis lyrata scaffold_201596.1 I 0.786
Bra004076 Brassica rapa Bra004076 I 0.786
Cagra.2261s0012 Capsella grandiflora Cagra.2261s0012 I 0.786
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I 0.779
PGSC0003DMG400011980 Solanum tuberosum PGSC0003DMG400011980 I 0.775
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.774
mgf004388m Mimulus guttatus mgf004388m I 0.767
ARR11 Arabidopsis thaliana AT1G67710 D 0.767
Eucgr.H04694 Eucalyptus grandis Eucgr.H04694 I 0.765
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I 0.755
Thhalv10000098m.g Eutrema salsugineum Thhalv10000098m.g I 0.743
orange1.1g027234m.g Citrus sinensis orange1.1g027234m.g I 0.739
Bra032035 Brassica rapa Bra032035 I 0.727
Bo4g157430 Brassica oleracea Bo4g157430 I 0.727
Aquca_011_00344 Aquilegia coerulea Aquca_011_00344 I 0.726
cassava32312.m1 Manihot esculenta cassava32312.m1 I 0.721
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.692
MTR_1g013180 Medicago truncatula MTR_1g013180 I 0.689
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.687
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.687
VIT_17s0000g10110 Vitis vinifera VIT_17s0000g10110 N 0.681
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.679
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.679
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.679
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.679
mgf014863m Mimulus guttatus mgf014863m I 0.679
mgf001591m Mimulus guttatus mgf001591m I 0.679
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.678
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.678
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.678
Lus10036303.g Linum usitatissimum Lus10036303.g I 0.677
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.671
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.671
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.671
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.671
mgf013006m Mimulus guttatus mgf013006m I 0.662