orange1.1g013528m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g013528m.g T288783_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.888 0.957
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.668 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g013528m Myb 171 221
orange1.1g020403m Myb 171 221
orange1.1g020415m Myb 171 221
orange1.1g020722m Myb 171 221
orange1.1g026842m Myb 171 221

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.909
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.909
29983.m003131 Ricinus communis 29983.m003131 I 0.909
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.909
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.909
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.909
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.909
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.909
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.909
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.909
TCM_008193 Theobroma cacao TCM_008193 I 0.909
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.909
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.909
Pm014123 Prunus mume Pm014123 I 0.909
MDP0000526864 Malus domestica MDP0000526864 I 0.909
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.909
MDP0000225179 Malus domestica MDP0000225179 I 0.909
PK27491.1 Cannabis sativa PK27491.1 I 0.909
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.909
cassava9823.m1 Manihot esculenta cassava9823.m1 I 0.894
Ca_02452 Cicer arietinum Ca_02452 I 0.891
PGSC0003DMG400009378 Solanum tuberosum PGSC0003DMG400009378 I 0.891
MTR_2g090675 Medicago truncatula MTR_2g090675 I 0.891
Ca_11268 Cicer arietinum Ca_11268 I 0.891
GLYMA06G44330 Glycine max GLYMA06G44330 I 0.891
GPRI1 Vitis vinifera VIT_12s0028g03100 I 0.891
GLYMA12G13430 Glycine max GLYMA12G13430 I 0.891
GLYMA12G33430 Glycine max GLYMA12G33430 I 0.891
GLYMA13G37010 Glycine max GLYMA13G37010 I 0.891
Solyc07g053630.2 Solanum lycopersicum Solyc07g053630.2 I 0.891
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.888
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.888
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.888
mgf004257m Mimulus guttatus mgf004257m I 0.888
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.888
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.888
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.888
Cla003791 Citrullus lanatus Cla003791 I 0.888
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.888
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.888
GPRI1 Arabidopsis thaliana AT2G20570 D 0.888
MTR_4g078810 Medicago truncatula MTR_4g078810 I 0.880
chr3.CM0160.680.nd Lotus japonicus chr3.CM0160.680.nd I 0.870
PDK_20s1662851g001 Phoenix dactylifera PDK_20s1662851g001 I 0.856
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.847
mgf012846m Mimulus guttatus mgf012846m I 0.842
mgf007181m Mimulus guttatus mgf007181m I 0.842
Thhalv10001986m.g Eutrema salsugineum Thhalv10001986m.g I 0.839
LPERR01G08320 Leersia perrieri LPERR01G08320 I 0.820
Gorai.008G155000 Gossypium raimondii Gorai.008G155000 I 0.820
GSMUA_Achr10G26160_001 Musa acuminata GSMUA_Achr10G26160_001 I 0.820
GSMUA_Achr7G11040_001 Musa acuminata GSMUA_Achr7G11040_001 I 0.820
ONIVA01G11450 Oryza nivara ONIVA01G11450 I 0.820
GLK2 Oryza sativa OS01G0239000 I 0.820
OMERI01G08840 Oryza meridionalis OMERI01G08840 I 0.820
Aquca_051_00026 Aquilegia coerulea Aquca_051_00026 I 0.820
OGLUM01G10130 Oryza glumaepatula OGLUM01G10130 I 0.820
Eucgr.A01857 Eucalyptus grandis Eucgr.A01857 I 0.820
OPUNC01G08680 Oryza punctata OPUNC01G08680 I 0.820
ORUFI01G09620 Oryza rufipogon ORUFI01G09620 I 0.820
mgf014879m Mimulus guttatus mgf014879m I 0.814
BRADI2G08287 Brachypodium distachyon BRADI2G08287 I 0.808
TRAES3BF062500050CFD_g Triticum aestivum TRAES3BF062500050CFD_g I 0.808
Sb03g000400 Sorghum bicolor Sb03g000400 I 0.802
Pavir.Eb00063 Panicum virgatum Pavir.Eb00063 I 0.802
GRMZM2G087804 Zea mays GRMZM2G087804 I 0.802
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.799
estExt_gwp_gw1.C_310256 Physcomitrella patens estExt_gwp_gw1.C_310256 I 0.798
fgenesh1_pm.scaffold_311000005 Physcomitrella patens fgenesh1_pm.scaffold_311000005 I 0.798
Pavir.Ea00014 Panicum virgatum Pavir.Ea00014 I 0.794
Pavir.Db01285 Panicum virgatum Pavir.Db01285 I 0.790
Sb10g008400 Sorghum bicolor Sb10g008400 I 0.790
OGLUM06G15080 Oryza glumaepatula OGLUM06G15080 I 0.790
OMERI06G15340 Oryza meridionalis OMERI06G15340 I 0.790
ONIVA06G16920 Oryza nivara ONIVA06G16920 I 0.790
MLOC_43537 Hordeum vulgare MLOC_43537 I 0.790
OBART03G02540 Oryza barthii OBART03G02540 I 0.790
BRADI1G43710 Brachypodium distachyon BRADI1G43710 I 0.790
LPERR06G12880 Leersia perrieri LPERR06G12880 I 0.790
F775_20285 Aegilops tauschii F775_20285 I 0.790
OB06G22250 Oryza brachyantha OB06G22250 I 0.790
ORGLA06G0126200 Oryza glaberrima ORGLA06G0126200 I 0.790
OPUNC06G13180 Oryza punctata OPUNC06G13180 I 0.790
Traes_7DL_58DDB90E3 Triticum aestivum Traes_7DL_58DDB90E3 I 0.790
Si006400m.g Setaria italica Si006400m.g I 0.790
BGIOSGA022875 Oryza indica BGIOSGA022875 I 0.790
GLK1 Oryza sativa OS06G0348800 I 0.790
ORUFI06G15000 Oryza rufipogon ORUFI06G15000 I 0.790
Si001336m.g Setaria italica Si001336m.g I 0.790
GSMUA_Achr6G05850_001 Musa acuminata GSMUA_Achr6G05850_001 I 0.789
MLOC_65876 Hordeum vulgare MLOC_65876 I 0.787
BGIOSGA002040 Oryza indica BGIOSGA002040 I 0.787
ORGLA01G0079000 Oryza glaberrima ORGLA01G0079000 I 0.787
Bo8g102300 Brassica oleracea Bo8g102300 I 0.784
Bra031129 Brassica rapa Bra031129 I 0.784
Bo7g003410 Brassica oleracea Bo7g003410 I 0.784
GLK2 Arabidopsis thaliana AT5G44190 I 0.771
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.771
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.771
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.771
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.771
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.771
OB01G18980 Oryza brachyantha OB01G18980 I 0.767
Pavir.J11422 Panicum virgatum Pavir.J11422 I 0.763
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.742
TRIUR3_15856 Triticum urartu TRIUR3_15856 I 0.737
GRMZM2G026833 Zea mays GRMZM2G026833 I 0.730
PGSC0003DMG400021857 Solanum tuberosum PGSC0003DMG400021857 I 0.728
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.728
Bra036482 Brassica rapa Bra036482 I 0.724
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.716
Bo7g067200 Brassica oleracea Bo7g067200 I 0.709
Bra033726 Brassica rapa Bra033726 I 0.709
Bra036015 Brassica rapa Bra036015 I 0.682
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.679
Cla008926 Citrullus lanatus Cla008926 I 0.678
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.678
PK19826.1 Cannabis sativa PK19826.1 I 0.675
TCM_015780 Theobroma cacao TCM_015780 I 0.675
Pm014733 Prunus mume Pm014733 I 0.675
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.675
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.675
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.675
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.675
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.668
APRR2 Arabidopsis thaliana AT4G18020 D 0.668
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.667
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.667
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.667
MDP0000237396 Malus domestica MDP0000237396 I 0.661