orange1.1g017727m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g017727m.g T288800_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.849 0.935
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.849 0.935
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g017727m Myb 14 62
orange1.1g017727m Myb 68 113

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

483 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_08797 Aegilops tauschii F775_08797 N 0.000
F775_16499 Aegilops tauschii F775_16499 N 0.000
Traes_3DS_31B0043F6 Triticum aestivum Traes_3DS_31B0043F6 N 0.000
Traes_6AS_D5A6B2CDD Triticum aestivum Traes_6AS_D5A6B2CDD N 0.000
Traes_6BS_A3531CD43 Triticum aestivum Traes_6BS_A3531CD43 N 0.000
Traes_6DS_5878FA87F Triticum aestivum Traes_6DS_5878FA87F N 0.000
Traes_6DS_E67EB0CBE Triticum aestivum Traes_6DS_E67EB0CBE N 0.000