TF Information

orange1.1g017978m.g *(Citrus sinensis)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	orange1.1g017978m.g	T288801_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PHL12 M01077_2.00	Arabidopsis thaliana	NWKATTCBNN	NNVGAATMWN	PBM Sullivan et al.(2014) pTH7098	0.819	0.851
PHL12 M07079_2.00	Arabidopsis thaliana	RGAATATTCYYTWN	NWARRGAATATTCY	Dap-seq OMalley et al.(2016) At3g12730_col_a	0.819	0.851
PHL12 M07080_2.00	Arabidopsis thaliana	NNRAAKATTCBHHN	NDDVGAATMTTYNN	Dap-seq OMalley et al.(2016) At3g12730_colamp_a	0.819	0.851
MYR1 M02309_2.00	Arabidopsis thaliana	NKATNCBNNN	NNNVGNATMN	PBM Weirauch et al.(2014) pTH8859	0.807	0.830
MYR2 M02294_2.00	Arabidopsis thaliana	NKATDCBNN	NNVGHATMN	PBM Weirauch et al.(2014) pTH7097	0.801	0.809
MYR2 M07063_2.00	Arabidopsis thaliana	NNDAAKATTCYHHN	NDDRGAATMTTHNN	Dap-seq OMalley et al.(2016) At3g04030_col_a	0.801	0.809
MYR2 M07064_2.00	Arabidopsis thaliana	VRAAKATTCBHWNNN	NNNWDVGAATMTTYB	Dap-seq OMalley et al.(2016) At3g04030_colamp_a	0.801	0.809
AT3G24120 M00729_2.00	Arabidopsis thaliana	NNKATDCBNN	NNVGHATMNN	PBM Chang et al.(2013) pTH7086	0.741	0.809
UNE16 M01270_2.00	Arabidopsis thaliana	NWKATTCBNN	NNVGAATMWN	PBM Lambert et al.(2019) pTH9967	0.741	0.809
AT3G24120 M07085_2.00	Arabidopsis thaliana	HAKATTCB	VGAATMTD	Dap-seq OMalley et al.(2016) At3g24120_col_a	0.741	0.809
AT3G24120 M07086_2.00	Arabidopsis thaliana	NDRAAKATTCBHHN	NDDVGAATMTTYHN	Dap-seq OMalley et al.(2016) At3g24120_colamp_a	0.741	0.809
PHL11 M07134_2.00	Arabidopsis thaliana	NNRAAKATTCYHHN	NDDRGAATMTTYNN	Dap-seq OMalley et al.(2016) AT5G45580_col_a	0.714	0.766
PHL11 M07135_2.00	Arabidopsis thaliana	NRAAKATTCYHHNN	NNDDRGAATMTTYN	Dap-seq OMalley et al.(2016) AT5G45580_colamp_a	0.714	0.766
PHL7 M02292_2.00	Arabidopsis thaliana	NWGATDCBNN	NNVGHATCWN	PBM Weirauch et al.(2014) pTH7253	0.688	0.787
PK10342.1 M02351_2.00	Cannabis sativa	WAGATKCS	SGMATCTW	PBM Weirauch et al.(2014) pTH9489	0.688	0.787
PHL7 M07040_2.00	Arabidopsis thaliana	DRNAKATTCBNHNNN	NNNDNVGAATMTNYH	Dap-seq OMalley et al.(2016) At2g01060_colamp_a	0.688	0.787
PHL7 M07041_2.00	Arabidopsis thaliana	VGAATATTCBNHH	DDNVGAATATTCB	Dap-seq OMalley et al.(2016) At2g01060_col	0.688	0.787
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
orange1.1g017978m	Myb	19	70	RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR
orange1.1g018383m	Myb	19	70	RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR
orange1.1g018419m	Myb	19	70	RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR
orange1.1g018531m	Myb	19	70	RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR
orange1.1g018611m	Myb	19	70	RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR

Links
Other Myb/SANT family TFs
Other *Citrus sinensis* TFs

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625 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

orange1.1g017978m.g (Citrus sinensis) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

625 Related TFs

Invalid Input OrderBy

orange1.1g017978m.g **(Citrus sinensis)
Myb/SANT**