orange1.1g021188m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g021188m.g T288827_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.861 0.925
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.861 0.925
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.806 0.839
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.806 0.839
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.745 0.796
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.718 0.774
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.707 0.742
MYB57
M01072_2.00
Arabidopsis thaliana
RCCTAAYT

ARTTAGGY
PBM
Sullivan et al.(2014)
pTH9748
0.695 0.731
MYB57
M07059_2.00
Arabidopsis thaliana
YNTACCTAACTHHH

DDDAGTTAGGTANR
Dap-seq
OMalley et al.(2016)
MYB57_col_a
0.695 0.731
MYB57
M07060_2.00
Arabidopsis thaliana
ACCTAAY

RTTAGGT
Dap-seq
OMalley et al.(2016)
MYB57_colamp_a
0.695 0.731
MYB24
M02311_2.00
Arabidopsis thaliana
RCCDAMYNN

NNRKTHGGY
PBM
Weirauch et al.(2014)
pTH8662
0.693 0.753
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.692 0.656
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN

NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.662 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g021188m Myb 28 75
orange1.1g021188m Myb 81 126

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

695 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AARA006779 Anopheles arabiensis AARA006779 N 0.000
ACEP24929 Atta cephalotes ACEP24929 N 0.000
ACOM042123 Anopheles coluzzii ACOM042123 N 0.000
ADAC009993 Anopheles darlingi ADAC009993 N 0.000
ADIR009008 Anopheles dirus ADIR009008 N 0.000
AEPI002763 Anopheles epiroticus AEPI002763 N 0.000
AFAF016384 Anopheles farauti AFAF016384 N 0.000
AFUN005064 Anopheles funestus AFUN005064 N 0.000
AGAP002163 Anopheles gambiae AGAP002163 N 0.000
AMAM014509 Anopheles maculatus AMAM014509 N 0.000
AMEC016444 Anopheles melas AMEC016444 N 0.000
AMEM001056 Anopheles merus AMEM001056 N 0.000
AQUA008618 Anopheles quadriannulatus AQUA008618 N 0.000
BGIBMGA009909 Bombyx mori BGIBMGA009909 N 0.000
br Drosophila melanogaster FBgn0000210 D 0.000
Cflo_02156--NP_001035356.1_APIME Camponotus floridanus Cflo_02156--NP_001035356.1_APIME N 0.000
CPIJ003271 Culex quinquefasciatus CPIJ003271 N 0.000
CpipJ_CPIJ003271 Culex pipiens CpipJ_CPIJ003271 N 0.000
GB48273 Apis mellifera GB48273 N 0.000
GE16700 Drosophila yakuba FBgn0234197 N 0.000
GI16494 Drosophila mojavensis FBgn0139242 N 0.000
HMEL012334 Heliconius melpomene HMEL012334 N 0.000
Hsal_01159--NP_001035356.1_APIME Harpegnathos saltator Hsal_01159--NP_001035356.1_APIME N 0.000
KGM_00053 Danaus plexippus KGM_00053 N 0.000
LCUP011136 Lucilia cuprina LCUP011136 N 0.000
LDEC009788 Leptinotarsa decemlineata LDEC009788 N 0.000
LLOJ000809 Lutzomyia longipalpis LLOJ000809 N 0.000
MDOA002234 Musca domestica MDOA002234 N 0.000
NV15003 Nasonia vitripennis NV15003 N 0.000
PPAI010690 Phlebotomus papatasi PPAI010690 N 0.000
SINV21863 Solenopsis invicta SINV21863 N 0.000
TC005476 Tribolium castaneum TC005476 N 0.000