orange1.1g036591m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g036591m.g T288877_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB49
M07140_2.00
Arabidopsis thaliana
HDBBYYACCWAMYWH

DWRKTWGGTRRVVHD
Dap-seq
OMalley et al.(2016)
MYB49_col_a
0.676 0.677
MYB49
M07141_2.00
Arabidopsis thaliana
NYYYACCTAMYWHN

NDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB49_colamp_a
0.676 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g036591m Myb 11 58
orange1.1g036591m Myb 64 109

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action