orange1.1g043612m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g043612m.g T288919_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.688 0.762
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.688 0.762
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.688 0.762
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g043612m Myb 14 61
orange1.1g043612m Myb 67 103

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10027201m.g Citrus clementina Ciclev10027201m.g I 0.820
Gorai.009G142200 Gossypium raimondii Gorai.009G142200 I 0.807
Bra021515 Brassica rapa Bra021515 I 0.805
Thhalv10021042m.g Eutrema salsugineum Thhalv10021042m.g I 0.805
Bo1g134790 Brassica oleracea Bo1g134790 I 0.805
cassava34928.m1 Manihot esculenta cassava34928.m1 I 0.802
Lus10015608.g Linum usitatissimum Lus10015608.g I 0.796
PRUPE_ppa015032mg Prunus persica PRUPE_ppa015032mg I 0.796
GLYMA08G20440 Glycine max GLYMA08G20440 I 0.796
Gorai.011G063900 Gossypium raimondii Gorai.011G063900 I 0.796
Pm013322 Prunus mume Pm013322 I 0.796
GLYMA13G42431 Glycine max GLYMA13G42431 I 0.796
TCM_029065 Theobroma cacao TCM_029065 I 0.796
PK22855.1 Cannabis sativa PK22855.1 I 0.796
MDP0000148894 Malus domestica MDP0000148894 I 0.796
GLYMA07G01050 Glycine max GLYMA07G01050 I 0.796
MYB26 Populus trichocarpa POPTR_0001s20370 I 0.793
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.793
cassava176.valid.m1 Manihot esculenta cassava176.valid.m1 I 0.793
Eucgr.F03143 Eucalyptus grandis Eucgr.F03143 I 0.788
Solyc03g121740.1 Solanum lycopersicum Solyc03g121740.1 I 0.788
Ca_02730 Cicer arietinum Ca_02730 I 0.787
GLYMA15G02955 Glycine max GLYMA15G02955 I 0.786
Ca_10069 Cicer arietinum Ca_10069 I 0.779
MYB26 Arabidopsis thaliana AT3G13890 I 0.775
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I 0.775
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I 0.775
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I 0.775
Carubv10015767m.g Capsella rubella Carubv10015767m.g I 0.775
Cla012793 Citrullus lanatus Cla012793 I 0.771
MTR_8g017540 Medicago truncatula MTR_8g017540 I 0.766
MTR_8g017440 Medicago truncatula MTR_8g017440 I 0.766
MTR_2g099740 Medicago truncatula MTR_2g099740 I 0.766
SapurV1A.1869s0040 Salix purpurea SapurV1A.1869s0040 I 0.766
evm.TU.supercontig_25.69 Carica papaya evm.TU.supercontig_25.69 I 0.766
SapurV1A.0538s0150 Salix purpurea SapurV1A.0538s0150 I 0.766
Aquca_020_00444 Aquilegia coerulea Aquca_020_00444 I 0.766
Cucsa.340960 Cucumis sativus Cucsa.340960 I 0.762
MYB26 Vitis vinifera VIT_09s0002g01670 I 0.762
PGSC0003DMG400037038 Solanum tuberosum PGSC0003DMG400037038 I 0.758
gene06920-v1.0-hybrid Fragaria vesca gene06920-v1.0-hybrid I 0.749
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I 0.748
MTR_8g017500 Medicago truncatula MTR_8g017500 I 0.740
Sb03g032600 Sorghum bicolor Sb03g032600 I 0.732
OB01G37410 Oryza brachyantha OB01G37410 I 0.732
OPUNC01G28160 Oryza punctata OPUNC01G28160 I 0.732
Pavir.Ea02594 Panicum virgatum Pavir.Ea02594 I 0.732
LPERR01G24370 Leersia perrieri LPERR01G24370 I 0.732
BRADI2G47887 Brachypodium distachyon BRADI2G47887 I 0.732
OB03G28290 Oryza brachyantha OB03G28290 I 0.730
Si002319m.g Setaria italica Si002319m.g I 0.729
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I 0.727
MTR_8g017390 Medicago truncatula MTR_8g017390 I 0.724
BGIOSGA004306 Oryza indica BGIOSGA004306 I 0.723
OLONG_008660 Oryza longistaminata OLONG_008660 I 0.723
ORGLA01G0234600 Oryza glaberrima ORGLA01G0234600 I 0.723
OS01G0709000 Oryza sativa OS01G0709000 I 0.723
F775_24942 Aegilops tauschii F775_24942 I 0.716
TRIUR3_28766 Triticum urartu TRIUR3_28766 I 0.716
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.713
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.713
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.712
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.710
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.710
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.710
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.710
F775_28951 Aegilops tauschii F775_28951 I 0.710
Pavir.J21520 Panicum virgatum Pavir.J21520 I 0.710
AMTR_s00079p00143780 Amborella trichopoda AMTR_s00079p00143780 I 0.706
AMTR_s00032p00221670 Amborella trichopoda AMTR_s00032p00221670 I 0.704
Traes_7AL_04D939077 Triticum aestivum Traes_7AL_04D939077 I 0.699
F775_17110 Aegilops tauschii F775_17110 I 0.699
GRMZM2G088783 Zea mays GRMZM2G088783 I 0.699
TRIUR3_25230 Triticum urartu TRIUR3_25230 I 0.699
MLOC_18177 Hordeum vulgare MLOC_18177 I 0.699
Traes_3AL_E3BF20F0D Triticum aestivum Traes_3AL_E3BF20F0D I 0.699
MTR_8g017350 Medicago truncatula MTR_8g017350 I 0.697
gene31836-v1.0-hybrid Fragaria vesca gene31836-v1.0-hybrid I 0.697
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.697
Pavir.Fb00364 Panicum virgatum Pavir.Fb00364 I 0.696
Pavir.J29561 Panicum virgatum Pavir.J29561 I 0.696
Sb07g003320 Sorghum bicolor Sb07g003320 I 0.696
OPUNC08G02760 Oryza punctata OPUNC08G02760 I 0.696
OBART08G03020 Oryza barthii OBART08G03020 I 0.696
OGLUM08G03030 Oryza glumaepatula OGLUM08G03030 I 0.696
OB08G13090 Oryza brachyantha OB08G13090 I 0.696
GRMZM2G325907 Zea mays GRMZM2G325907 I 0.696
LPERR08G03020 Leersia perrieri LPERR08G03020 I 0.696
ONIVA06G02400 Oryza nivara ONIVA06G02400 I 0.696
OMERI08G02950 Oryza meridionalis OMERI08G02950 I 0.696
BGIOSGA027659 Oryza indica BGIOSGA027659 I 0.696
ORUFI08G03380 Oryza rufipogon ORUFI08G03380 I 0.696
OS08G0151300 Oryza sativa OS08G0151300 I 0.696
ORGLA08G0023900 Oryza glaberrima ORGLA08G0023900 I 0.696
MTR_8g017340 Medicago truncatula MTR_8g017340 I 0.693
Bostr.22252s0219 Boechera stricta Bostr.22252s0219 I 0.692
TRIUR3_27902 Triticum urartu TRIUR3_27902 N 0.691
Pm023938 Prunus mume Pm023938 I 0.690
evm.TU.supercontig_57.32 Carica papaya evm.TU.supercontig_57.32 I 0.689
Carubv10014093m.g Capsella rubella Carubv10014093m.g I 0.688
MYB83 Arabidopsis thaliana AT3G08500 D 0.688
Cagra.2991s0041 Capsella grandiflora Cagra.2991s0041 I 0.688
Bo5g139830 Brassica oleracea Bo5g139830 I 0.688
Bra029696 Brassica rapa Bra029696 I 0.688
MYB83 Arabidopsis lyrata fgenesh2_kg.3__848__AT3G08500.1 I 0.688
Thhalv10021052m.g Eutrema salsugineum Thhalv10021052m.g I 0.688
Solyc10g005240.2 Solanum lycopersicum Solyc10g005240.2 I 0.686
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.685
GSMUA_Achr8G03510_001 Musa acuminata GSMUA_Achr8G03510_001 I 0.684
SapurV1A.0119s0140 Salix purpurea SapurV1A.0119s0140 I 0.683
SapurV1A.0098s0320 Salix purpurea SapurV1A.0098s0320 I 0.683
Cagra.6972s0001 Capsella grandiflora Cagra.6972s0001 I 0.683
Bostr.29223s0142 Boechera stricta Bostr.29223s0142 I 0.683
POPTR_0001s09810 Populus trichocarpa POPTR_0001s09810 I 0.683
Bo9g029530 Brassica oleracea Bo9g029530 I 0.683
Aquca_013_00221 Aquilegia coerulea Aquca_013_00221 I 0.683
Carubv10021858m.g Capsella rubella Carubv10021858m.g I 0.683
Gorai.004G138300 Gossypium raimondii Gorai.004G138300 I 0.683
MTR_8g098860 Medicago truncatula MTR_8g098860 I 0.683
Thhalv10023948m.g Eutrema salsugineum Thhalv10023948m.g I 0.683
MTR_5g010020 Medicago truncatula MTR_5g010020 I 0.683
gene31835-v1.0-hybrid Fragaria vesca gene31835-v1.0-hybrid I 0.683
AtMYB103 Arabidopsis thaliana AT1G63910 I 0.683
Eucgr.D01819 Eucalyptus grandis Eucgr.D01819 I 0.683
PK02515.1 Cannabis sativa PK02515.1 I 0.683
Lus10024669.g Linum usitatissimum Lus10024669.g I 0.683
Ciclev10021161m.g Citrus clementina Ciclev10021161m.g I 0.683
Bo9g033970 Brassica oleracea Bo9g033970 I 0.683
Cla011601 Citrullus lanatus Cla011601 I 0.683
orange1.1g020613m.g Citrus sinensis orange1.1g020613m.g I 0.683
GLYMA08G02080 Glycine max GLYMA08G02080 I 0.683
Pm023937 Prunus mume Pm023937 I 0.683
PRUPE_ppa019529mg Prunus persica PRUPE_ppa019529mg I 0.683
GLYMA01G43120 Glycine max GLYMA01G43120 I 0.683
TCM_016332 Theobroma cacao TCM_016332 I 0.683
AtMYB103 Vitis vinifera VIT_02s0025g00320 I 0.683
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000072 I 0.683
POPTR_0003s13190 Populus trichocarpa POPTR_0003s13190 I 0.683
30190.m011268 Ricinus communis 30190.m011268 I 0.683
GLYMA11G02400 Glycine max GLYMA11G02400 I 0.683
cassava39324.m1 Manihot esculenta cassava39324.m1 I 0.683
Lus10032298.g Linum usitatissimum Lus10032298.g I 0.683
cassava33475.m1 Manihot esculenta cassava33475.m1 I 0.683
Cucsa.303440 Cucumis sativus Cucsa.303440 I 0.683
PRUPE_ppa016196mg Prunus persica PRUPE_ppa016196mg I 0.682
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I 0.682
cassava32908.m1 Manihot esculenta cassava32908.m1 I 0.681
POPTR_0009s06630 Populus trichocarpa POPTR_0009s06630 I 0.681
POPTR_0001s27430 Populus trichocarpa POPTR_0001s27430 I 0.681
SapurV1A.0027s0350 Salix purpurea SapurV1A.0027s0350 I 0.681
Bo5g009920 Brassica oleracea Bo5g009920 I 0.679
gw1.149.61.1 Physcomitrella patens gw1.149.61.1 I 0.679
TCM_005885 Theobroma cacao TCM_005885 I 0.678
Bra027668 Brassica rapa Bra027668 I 0.678
GLYMA13G07020 Glycine max GLYMA13G07020 I 0.678
Eucgr.G03385 Eucalyptus grandis Eucgr.G03385 I 0.675
GSMUA_Achr6G36930_001 Musa acuminata GSMUA_Achr6G36930_001 I 0.675
TCM_005977 Theobroma cacao TCM_005977 I 0.673
Ciclev10033941m.g Citrus clementina Ciclev10033941m.g I 0.672
e_gw1.24.66.1 Physcomitrella patens e_gw1.24.66.1 I 0.672
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.672
orange1.1g019619m.g Citrus sinensis orange1.1g019619m.g I 0.672
fgenesh1_pg.scaffold_189000016 Physcomitrella patens fgenesh1_pg.scaffold_189000016 I 0.672
Pm010927 Prunus mume Pm010927 I 0.671
TRIUR3_15022 Triticum urartu TRIUR3_15022 N 0.670
GLYMA05G37460 Glycine max GLYMA05G37460 I 0.670
Solyc02g082040.2 Solanum lycopersicum Solyc02g082040.2 I 0.670
Gorai.001G138800 Gossypium raimondii Gorai.001G138800 I 0.669
MDP0000263595 Malus domestica MDP0000263595 I 0.669
Gorai.013G251100 Gossypium raimondii Gorai.013G251100 I 0.669
OBART07G15150 Oryza barthii OBART07G15150 I 0.667
OMERI07G11910 Oryza meridionalis OMERI07G11910 I 0.667
OPUNC07G13970 Oryza punctata OPUNC07G13970 I 0.667
LPERR07G12760 Leersia perrieri LPERR07G12760 I 0.667
GRMZM2G172327 Zea mays GRMZM2G172327 I 0.667
BGIOSGA024270 Oryza indica BGIOSGA024270 I 0.667
ORGLA07G0124200 Oryza glaberrima ORGLA07G0124200 I 0.667
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.667
ORUFI07G15620 Oryza rufipogon ORUFI07G15620 I 0.667
Pavir.Ba00923 Panicum virgatum Pavir.Ba00923 I 0.667
Si030152m.g Setaria italica Si030152m.g I 0.667
Pavir.Bb02786 Panicum virgatum Pavir.Bb02786 I 0.667
Sb02g033830 Sorghum bicolor Sb02g033830 I 0.667
OS07G0497500 Oryza sativa OS07G0497500 I 0.667
Gorai.006G129100 Gossypium raimondii Gorai.006G129100 I 0.666
Bra027771 Brassica rapa Bra027771 I 0.666
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.665
Gorai.004G172700 Gossypium raimondii Gorai.004G172700 I 0.665
cassava39861.m1 Manihot esculenta cassava39861.m1 I 0.664
mgf024107m Mimulus guttatus mgf024107m I 0.664
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.663
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.663
Gorai.003G155400 Gossypium raimondii Gorai.003G155400 I 0.661